Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9375g00002 ATGGCTAATTTTGAGAATGACAAGCGCCCAATGTTGTCGGATACAGATGCACAACCATACGATGAACCTTCGGATTCTAAATTCCGAAGGATGGTAACCAGGACTCAAAGCGCTTCAATTTCTATTCCCATGAGTTCCTTGGAGTCATATGAGAAAGAAACTAGCCTTGTGGGACATACTGGTCCACTTCTGAGCAAGAGAAAAACACCCTATATGCATATGAGTGGTCCATTATATGCTACCACTGGAACTGGAAATCTTTTGCAGAAGCATGTTGTATCGGGAAACAAAGCAGATGACAGAAATACAGATAATTTTTCTACTCTCCATGGCTCAAGTTCAAATTACCAAAATAGTGACTATGATAGAAAAAATGAACACTTACTAAGGTCTGGGCAACTGGGAATGTGCAATGATCCTTATTGTACTACTTGCCCTACTTACTTCAATGCTTCTCAGCAAAGAAATCCAAAATCTTCTGCTAGATGGGATCCAAAGTTCCATAATGCTCTTTATGGGGATGCCAAGAGTTTTGTGAGGAAACTTCCTTCTTTATTTTCTTCTTATGTTCCTGGAGTTATGAACCCTCACGCTAAAGTTGTACAAAAGTGGAGCAAATTTTTGGCCATTTTTTGCTTAATTGGTATTTTTGTGGACCCATTGTTTTTCTTTTCACTCTATGTGGAGAAGGTGAATAAATGCATTGTTATCAACTGGCCATTGGCAACAACACTTGCTTTAGTTAGATGCGTGAATGATTTTGTTTATTTCCTTAACATTCTTCTCCAGGTATCGTCTCGTTAA 804 0.3868 MANFENDKRPMLSDTDAQPYDEPSDSKFRRMVTRTQSASISIPMSSLESYEKETSLVGHTGPLLSKRKTPYMHMSGPLYATTGTGNLLQKHVVSGNKADDRNTDNFSTLHGSSSNYQNSDYDRKNEHLLRSGQLGMCNDPYCTTCPTYFNASQQRNPKSSARWDPKFHNALYGDAKSFVRKLPSLFSSYVPGVMNPHAKVVQKWSKFLAIFCLIGIFVDPLFFFSLYVEKVNKCIVINWPLATTLALVRCVNDFVYFLNILLQVSSR 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9375g00002 267 MobiDBLite consensus disorder prediction 96 120 - -
Vium9375g00002 267 MobiDBLite consensus disorder prediction 99 119 - -
Vium9375g00002 267 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 137 264 - -
Vium9375g00002 267 MobiDBLite consensus disorder prediction 1 27 - -
Vium9375g00002 267 MobiDBLite consensus disorder prediction 9 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9375g00002 Vium-Chr9375 4190 9720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9375g00002 5 263 Ion Channels AT3G17700 44.906 1.10e-71 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9375g00002 K05391 - vum:124848376 551.977