Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9375g00001 ATGGCTAATTTTGAGAATGACAAGCGCCCAATGTTGTCGGATACAGATGCACAACCATACGATGAACCTTCGGATTCTAAATTCCGAAGGATGGTAACCAGGACTCAAAGCGCTTCAATTTCTATTCCCATGAGTTCCTTGGAGTCATATGAGAAAGAAACTAGCCTTGTGGGACATACTGGTCCACTTCTGAGCAAGAGAAAAACACCCTATATGCATATGAGTGGTCCATTATATGCTACCACTGGAACTGGAAATCTTTTGCAGAAGCATGTTGTATCGGGAAACAAAGCAGATGACAGAAAGACAGATAATTTTTCTACTCTCCATGGCTCAAGTTCAAATTACCAAAATAGTGACTATGATAGAAAAAATGAACACTTACTAAGGTCTGGGCAACTGGGAATGTGCAATGATCCTTATTGTACTACTTGCCCTACTTACTTCAATGCTTCTCAGCAAAGAAATCCAAAATCTTCTGCTAGATGGGATCCAAAGTTCCATAATGCTCTTTATGGGGATGCCAAGAGTTTTGTGAGGAAACTTCCTTCTTTATTTTCTTCTTATGTTCCTGGAGTTATGAACCCTCACGCTAAAGTTGTACAAAAGTGGAGCAAATTTTTGGCCATTTTTTGCTTAATTGGTATTTTTGTGGACCCATTGTTTTTCTTTTCACTCTATGTGGAGAAGGTGAATAAATGCATTGTTATCAACTGGCCATTGGCAACAACACTTGCTTTAGTTAGATGCGTGAATGAT 759 0.3913 MANFENDKRPMLSDTDAQPYDEPSDSKFRRMVTRTQSASISIPMSSLESYEKETSLVGHTGPLLSKRKTPYMHMSGPLYATTGTGNLLQKHVVSGNKADDRKTDNFSTLHGSSSNYQNSDYDRKNEHLLRSGQLGMCNDPYCTTCPTYFNASQQRNPKSSARWDPKFHNALYGDAKSFVRKLPSLFSSYVPGVMNPHAKVVQKWSKFLAIFCLIGIFVDPLFFFSLYVEKVNKCIVINWPLATTLALVRCVND 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9375g00001 253 MobiDBLite consensus disorder prediction 94 120 - -
Vium9375g00001 253 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 137 253 - -
Vium9375g00001 253 MobiDBLite consensus disorder prediction 1 27 - -
Vium9375g00001 253 MobiDBLite consensus disorder prediction 9 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9375g00001 Vium-Chr9375 5 4039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9375g00001 5 253 Ion Channels AT3G17700 44.706 7.35e-68 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9375g00001 K05391 - vum:124848376 523.857