Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9337g00001 ATGGCTAATGAAGATGAACCCAAAAACCACCTCTTGGGCATCAGAAATCTCTCTCATAAGACTCTCCTTCAGAGCGATGCACTCTATCAGTACATACTTGAAACCAGTGTTTATCCAAGAGAGCACGAGTGCTTGAAGGAGATCCGCGAGATGACAGAAAAACACCCTCGGAACATAATGGCTACACCACCAGACGAAGGACAATTTCTGAGCATGCTTATTAAGCTCATTAATGCCAAGAACACCTTGGAAATTGGTGTATACACCGGTTACTCTCTTCTTTCCACCGCCCTGGCTCTTCCCCCTGATGGAAAGATCTTGGCTTTGGAAGTGAAACGCGAAAAATATGAATTGGGTTTGCCCATCATTGAAAAAGCTGGTGTCGCTCACAAGATCGACTTCAGAGAAGGACCTGCTCTTCCTTTTCTTGACGAACTGCTTAAAGATGAAAATAAGAAGGGACAGTTCGATTTCGTTTTCGTGGATGCTGATAAGAACAATTACTTGAACTATCACAAGAGAGTAATTGATCTGGTGAAGGTGGGAGGTCTGATCGGATACGACAACACCCTATGGGCTGGATCTGTGGCCGCGCCTCCTGATGCACCGTTGATGGATTACGTTAAACCTCTTCGCGGCTATGTGATGGAGTTCAACAAGTACGTGGCACAAGATTCAAGGATTGAGATTTGCCAGCTCCCCGTGGGTGATGGGATTACCCTGTGCCGCCGCATCATCTGA 741 0.4629 MANEDEPKNHLLGIRNLSHKTLLQSDALYQYILETSVYPREHECLKEIREMTEKHPRNIMATPPDEGQFLSMLIKLINAKNTLEIGVYTGYSLLSTALALPPDGKILALEVKREKYELGLPIIEKAGVAHKIDFREGPALPFLDELLKDENKKGQFDFVFVDADKNNYLNYHKRVIDLVKVGGLIGYDNTLWAGSVAAPPDAPLMDYVKPLRGYVMEFNKYVAQDSRIEICQLPVGDGITLCRRII 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9337g00001 246 Pfam O-methyltransferase 34 245 IPR002935 GO:0008171
Vium9337g00001 246 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 245 IPR002935 GO:0008171
Vium9337g00001 246 Gene3D Vaccinia Virus protein VP39 11 246 IPR029063 -
Vium9337g00001 246 PANTHER O-METHYLTRANSFERASE-RELATED 18 245 - -
Vium9337g00001 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 244 IPR029063 -
Vium9337g00001 246 FunFam Caffeoyl-CoA O-methyltransferase 1 14 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9337g00001 Vium-Chr9337 24060 25515 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9337g00001 4 245 Monolignol Biosynthesis Gene Families AT4G34050 72.727 2.01e-132 373