Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9330g00015 ATGGATGCAGTTGACGAGGAGTATCTCAAGGAAATAGAGATAGCTCGACGTGAACTTCGTTCTTTCATCACCAACAATAAATGCGCCCCTCTCATTATTCAACTAGCGTGGAACGATGCTGCAACGTATGATGCCAGAAGCAGAACAGGAGGCCCCAATGGTTCTATTAGATTCATCACTAAACACGAAGCAATCAAGGAACTGCAAAAAGCAGTTCAATACTGTGATATAGTGAAGCACAGACTTAAACTTAAGAAGGTTTCATACGCAGACCTTTACCAGCTTGCTGGTGTTGTTGCAATAGAGGTTACACAGGGTCCAATTATTGACTTTGTTCCTGGCAGAAAGGATTCAAATGAATCTCCACGAGTCCAAGCACACTTTCTAAATGGTGAAGAAGATGCAAGGAGTTTAAGGAGAAAATTTTCTCGCATGGGACTAAGTGAAGACGAAGACATAGTAGTTCTATGTGGAGGCCACGCTTTGATAAGAGCTATGCATCCAAAAGTAGCAACGAGAGAGACACCTAAGGGTGAGACGCATGAAGATCGCAGCAAGTTCGAAGAAAGAAAATGGACAAAGGAACCTTTGAAGTTTGATAACTCCTATTTTAAGGAACTACTGAGTAAGGGTGCATCCTTTTCGAGGCTTCCCATGGACTCTGCTTTAGTAGAGGATCAAAGATTTTATCACTATGTTGAACGGTATGCTAAGGATGAGGATATCTTTTTTAAAGAATATGCAATTTCACATAAGAAACTCTCAGAGCTGGGCTTCGATCCCCAAAATCTAAACATGTCCAAGGGACTATATCAGAAGCTAAATCAGCACAGGGGACTCGTAGGAATCGGTATAATATCAGTTGCGGTGGCCGGAATATTAGGTTACTTACATAAGAAGAAGAAAAATCAATTGAAAGATTGA 924 0.4113 MDAVDEEYLKEIEIARRELRSFITNNKCAPLIIQLAWNDAATYDARSRTGGPNGSIRFITKHEAIKELQKAVQYCDIVKHRLKLKKVSYADLYQLAGVVAIEVTQGPIIDFVPGRKDSNESPRVQAHFLNGEEDARSLRRKFSRMGLSEDEDIVVLCGGHALIRAMHPKVATRETPKGETHEDRSKFEERKWTKEPLKFDNSYFKELLSKGASFSRLPMDSALVEDQRFYHYVERYAKDEDIFFKEYAISHKKLSELGFDPQNLNMSKGLYQKLNQHRGLVGIGIISVAVAGILGYLHKKKKNQLKD 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9330g00015 307 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 5 261 IPR044831 GO:0004601|GO:0034599
Vium9330g00015 307 Pfam Peroxidase 17 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9330g00015 307 FunFam Peroxidase 1 95 - -
Vium9330g00015 307 Gene3D - 15 258 - -
Vium9330g00015 307 ProSiteProfiles Plant heme peroxidase family profile. 29 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9330g00015 307 SUPERFAMILY Heme-dependent peroxidases 23 263 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium9330g00015 307 Gene3D Peroxidase, domain 2 129 251 - -
Vium9330g00015 307 PRINTS Haem peroxidase superfamily signature 105 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9330g00015 307 PRINTS Haem peroxidase superfamily signature 29 43 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9330g00015 307 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9330g00015 307 PRINTS Haem peroxidase superfamily signature 87 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9330g00015 307 PRINTS Haem peroxidase superfamily signature 152 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9330g00015 307 PRINTS Plant ascorbate peroxidase signature 86 104 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vium9330g00015 307 PRINTS Plant ascorbate peroxidase signature 105 117 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vium9330g00015 307 PRINTS Plant ascorbate peroxidase signature 146 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vium9330g00015 307 PRINTS Plant ascorbate peroxidase signature 8 28 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vium9330g00015 307 PRINTS Plant ascorbate peroxidase signature 29 44 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vium9330g00015 307 PRINTS Plant ascorbate peroxidase signature 220 244 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vium9330g00015 307 PRINTS Plant ascorbate peroxidase signature 47 57 IPR002207 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9330g00015 Vium-Chr9330 53573 57307 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9330g00015 86 258 Peroxidase AT4G31760 30.303 9.58e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9330g00015 K00434 - gmx:100813526 310.071