Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9320g00001 ATGTCTGGTGCCAATGCTCGGTGTATTGCAATGCTTCAAGCATTTCAGGAGGCCATCAAAGACTACAAGGTTCCACAGGAGAAGACTCTTGTGAGGGACTTAACAGCAAAAATTAGTAGTTATGTATCATTTCTTATTGAGTGTCGACCTCTGTCAATCAGCATGGGAAATGCTATTAGGTTTCTCAAAAGTCGGATAGCCAAGTTACCTTTGACCTTGTCTGAATCAGAAGCAAAAGCTTCTCTCCATTCAGATATTGAGCGTTTTATTAGTGAGAAGATTATACTCGCCAACAAAGTGATAGTGAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACGTATGGGTCCTCGACAGCTGTTGAAATGATACTATTACATGCACATGAGTTAGGAAGACAGTTTCGCGTTGTGGTAGTTGACTCTTGTCCAAAGCTTAGAGGGCAACTTTTGCTTCGCAGGCTGGTGGAGAAAGGTCTTAGCTGTACATACACTCATATAAATGCTGTTTCCTACATAATGAAGGAAGTTACTCGAGTATTTCTGGGTGCTTCATCAGTTTTATCTAATGGAACAGTATATTCAAGAGTAGGGACTGCATGTGTTGCAATGGTTGCTCATGCATTCCGTGTACCTGTCATAGTATGTTGTGAGGCATATAAATTTCATGAACGGGTACAGTTGGACTCAATATGCTCTAATGATCTTGGTGATCCAGATGCAATTTCAAATGTATTGGGTAGAGAGGATGTCAACCACTTGGATGGCTGGGCCAATATTGAAAATCTGCAACTCTTAAATCTGATTTATGATGCAACACCTTCAGATTATGTTTCAATGATTGTCACAGATTATGGCATGGTTCCCCCTACAAGTGTGCCTGTAATTGTAAGAGAATACGGGAGAGAACAGGTCTGGATATAA 933 0.4062 MSGANARCIAMLQAFQEAIKDYKVPQEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTLSESEAKASLHSDIERFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSTAVEMILLHAHELGRQFRVVVVDSCPKLRGQLLLRRLVEKGLSCTYTHINAVSYIMKEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNDLGDPDAISNVLGREDVNHLDGWANIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9320g00001 310 Gene3D - 96 303 IPR042529 -
Vium9320g00001 310 SUPERFAMILY NagB/RpiA/CoA transferase-like 2 303 IPR037171 -
Vium9320g00001 310 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 2 307 - -
Vium9320g00001 310 Pfam Initiation factor 2 subunit family 2 293 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9320g00001 Vium-Chr9320 7 2943 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9320g00001 1 310 Eukaryotic Initiation Factors Gene Family AT5G38640 81.290 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9320g00001 K03680 - gmx:100775998 578.941