Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium931g00003 ATGGGCGGTGATTGGAGTTGGAGCAGGACGAAATGGATTGGGTTGGTGGCGGCGGTGTGGATTCAAGCCATCTCCGGCAACAACTACACTTTCTCAAATTACTCCGACGCTCTGAAATCCCTCATGCATCTAACGCAACTCCAACTCAACAATCTCTCGGTGGCCAAGGACGTCGGAAAGGCATTTGGGCTTCTTGCCGGGCTTGCTTCTGACAAATTCCCCACTTGGATCATTCTCCTCATCGGCTCCGTTGAAGGTCTCGTCGGTTATGGCGTTCAGTGGCTAGTCGTCAGCCAAAGAATCCAACCCCTTCCCTACTACCAGATGTGCATATTTCTCTGCCTGGGTGGCAACAGCACCACATGGATGAACACGGCGGTTCTGGTCACCTGCATCCGCAACTTCCGCCGCAACAGAGGTCCTGTTTCCGGCATTCTCAAAGGCTACGTCGGATTGAGCACCGCCATATTCACCGACCTCTGTTCCGCTCTCTTCACGAACGACCCTGCTTCTTTTCTCCTCATGCTCGCTCTCATCCCATTCGTCGTTTGCCTCTCCGGAATCCTTTTCCTCCGTGAGATTCCTTCCGCCGCCGTCCAGGATGACGAAGAGTCCACTTATTTCGGGGTCTTCAACGCCGTCGCCGTCGCAGTCGCCGTTTACCTCTTGGCCTTCGGCTTCGTGCCTAACCCTAGCGCGTTGGCGTCTCGAGCTTTCTCTGTCGGTTTGCTTGTTCTGTTGGCGGCGCCGTTGGGAATCCCGGTCCACTCTTACTTGAAGGCGCGTGGGTTGGACAAGATCAGACCGGATTTCGAGGGGCGGGGTGAGGAACCGTTGCTTCGCGGAAACGACAACGGAAATGAATGCCAGGTGGAGAGAGGAAATGTGTTAGCGGAAGACGCGGAAGCGGAAGCGGTGGGAAAGATTGGACCGGCGGTGGGGGAGGAGCACACGGTATGGGAGGTGCTGAGAACCGTGGACTTTTGGATTCTGTTCGTATCGTTTCTTTGCGGGGTTGGAACTGGTTTGGCGGTTATGAATAATATGGGTCAAATCGGGTTGGCGCTGGGTTATTCGGATGTGTCCCTCTTCGTGTCTTTGACCAGTATTTGGGGCTTTTTCGGTCGGATCGTCTCGGGTTCTGTTTCGGAGCACTTCATCAAAAGAGGCGGAACTCCAAGACCCCTTTGGAATGCAGGTTCTCAAATATTGATGGGCGTGGGATACATACTGCTGGCCATGGCTATGCCAGGTTCACTTTACATAGGCTCCATTGTGGTTGGCATATGCTACGGAGTGAGGCTAGCCATCACTGTGCCAACAGCCTCAGAGTTATTTGGCCTCAGATATTATGGACTCATTTACAACATTCTAATCCTTAACCTTCCCCTTGGCTCTTTCCTCTTTTCTGGTCTCCTAGCTGGCATTCTCTATGATATGGAGGCTACCACCACCACAGGAGGAGGCAACACTTGTATTGGACCTCATTGTTACAGACTAGTATTCATTGTTATGGCTGCAGCCTGTCTTATCGGCTTCTTCTTAGACCTTCTTCTATCGATCAGAACCAAGATGCTTTACAAAAGAATCTACTTCACCAAAAACTCCAACAAAAACTCACTCACATCAACTAGGCGATGA 1641 0.5198 MGGDWSWSRTKWIGLVAAVWIQAISGNNYTFSNYSDALKSLMHLTQLQLNNLSVAKDVGKAFGLLAGLASDKFPTWIILLIGSVEGLVGYGVQWLVVSQRIQPLPYYQMCIFLCLGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFTNDPASFLLMLALIPFVVCLSGILFLREIPSAAVQDDEESTYFGVFNAVAVAVAVYLLAFGFVPNPSALASRAFSVGLLVLLAAPLGIPVHSYLKARGLDKIRPDFEGRGEEPLLRGNDNGNECQVERGNVLAEDAEAEAVGKIGPAVGEEHTVWEVLRTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSEHFIKRGGTPRPLWNAGSQILMGVGYILLAMAMPGSLYIGSIVVGICYGVRLAITVPTASELFGLRYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTTGGGNTCIGPHCYRLVFIVMAAACLIGFFLDLLLSIRTKMLYKRIYFTKNSNKNSLTSTRR 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium931g00003 546 CDD MFS_Mch1p_like 11 512 - -
Vium931g00003 546 Gene3D MFS general substrate transporter like domains 5 204 IPR036259 -
Vium931g00003 546 Gene3D MFS general substrate transporter like domains 320 525 IPR036259 -
Vium931g00003 546 SUPERFAMILY MFS general substrate transporter 8 524 IPR036259 -
Vium931g00003 546 Pfam Nodulin-like 11 255 IPR010658 -
Vium931g00003 546 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium931g00003 Vium-Chr931 12979 15742 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium931g00003 11 539 Nodulin-like Gene Family AT4G34950 67.572 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium931g00003 - - gmx:100813607 880.167