Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9319g00003 ATGGCTAAAGAGGTTAACAAGCAAAGAAGGGTTAAGGTTCCTTTCAGCGCAGAAGACACTGCTTCTCTGTTGCAAAGATACGATGCACCAACGGTTTTGACGTTGCTTCAGGAATTGGCCAATTATCCGTATTCCAAGTTTAACTGGAATGATTTGGCGGCCAAAACTTCAACCGGAATTTCTAATGCTAGAGAGTATCAAATGCTGTGGCGACATTTGGCGTATGGTCACTCCATGGCAAATTTGGATGACGATGCTCAACCTTTGGATGATGACAGTGACTTGGAGAGTGAACGAGAACCATTACCTCGCTTAAACAGGGAAACTGCAACCGAAGCTGCAGCATTTGTTAAGGTAATTATGGCATCTTTTAAACTGGGTGAATCCAGTGCTACTAGTTCAGTGATTCAAGCTCCGTTGACTATAAATACTCCCTCTACCATTGATAAGAATGAAAGTTCGAGCAACACCGATATTATTTTTCCAGTAACAGTGAAGAGACAGACACTGCCAAATACATCATCAACAAGAGTGGTAGAAGGCAATGGTTCAGTCAGAAGTAGCACATCTATTAAAAAGAAAAGAGAACCATGGTCAGAGCAAGAGGATCTGCAATTACGAGATGCCGTTCAGAGGTGGGGTGAAGGTAACTGGGCAACTATGATTAAAAAAGACGACTTTCCTATCAAGAGAAGCACCTCACAATTATCTAAGAGGTGGAGCACATTGCGAAAGAGAGAAGGCGACTTCAATTGA 756 0.4246 MAKEVNKQRRVKVPFSAEDTASLLQRYDAPTVLTLLQELANYPYSKFNWNDLAAKTSTGISNAREYQMLWRHLAYGHSMANLDDDAQPLDDDSDLESEREPLPRLNRETATEAAAFVKVIMASFKLGESSATSSVIQAPLTINTPSTIDKNESSSNTDIIFPVTVKRQTLPNTSSTRVVEGNGSVRSSTSIKKKREPWSEQEDLQLRDAVQRWGEGNWATMIKKDDFPIKRSTSQLSKRWSTLRKREGDFN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9319g00003 251 ProSiteProfiles Myb-like domain profile. 190 244 IPR001005 -
Vium9319g00003 251 Gene3D - 187 248 - -
Vium9319g00003 251 MobiDBLite consensus disorder prediction 177 199 - -
Vium9319g00003 251 CDD SANT_TRF 197 245 - -
Vium9319g00003 251 MobiDBLite consensus disorder prediction 83 102 - -
Vium9319g00003 251 SMART sant 194 246 IPR001005 -
Vium9319g00003 251 Pfam Myb-like DNA-binding domain 195 243 IPR001005 -
Vium9319g00003 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 190 248 IPR017930 -
Vium9319g00003 251 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 3 251 - -
Vium9319g00003 251 SUPERFAMILY Homeodomain-like 192 245 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9319g00003 Vium-Chr9319 6104 10780 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vium9319g00003 Myb_DNA-binding 3.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9319g00003 - - gmx:100819057 320.857