Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium930g00003 ATGGCCGCCGCAGCGCCGCCTCCGGCCCCAACTCCGGCTCCGGAGCCCGTCACATCGTTACCGGAAACCACCCCTCTCTTCACGCGCATCCGCCTGGCCACCCCCTCCGACGTTCCACAAATCCACAAACTGATCCACCAGATGGCCGTCTTTGAACGCCTGACTCACCTCTTCTCCGCCACAGAGTCCTCCCTCGCAGCTACCCTTTTCTCCCCAACCGCCCAGCCCTTCCACTCCTTCACCATCTTCCTTCTAGAAGCTTCTCCCAAACCCTTCGCCGTTTCAAACGTGGACTCGAACCCGTTCTTCACACCCCTGACGAAGTTCGTGAATCTGAGTATCCCCATTGAGGACCCCGAGCGAGAGACGTTCAAGACGACGGATGATGTGACGGTTGTGGGGTTTGTGTTATTTTTCCCGAACTACTCAACCTTTCTTGGGAAGCCAGGGTTTTACGTGGAGGATTTGTTCGTGAGGGAGTGTTACAGGAGAAAGGGGTTTGGGAGAATGCTTCTGTCGGCGGTGGCGACACAGGCGGTGAAGATGGGTTACGGGAGGGTGGAGTGGGTGGTGCTCGATTGGAATGTGAATGCCATTAAGTTTTATGAAGAGATGGGTGCCGATCTCTTGAACGAGTGGAGGATTTGCAGGTTAACTGGGGAGGCTCTTCAGGCTTATGGAGGTGCCCATTAG 693 0.5599 MAAAAPPPAPTPAPEPVTSLPETTPLFTRIRLATPSDVPQIHKLIHQMAVFERLTHLFSATESSLAATLFSPTAQPFHSFTIFLLEASPKPFAVSNVDSNPFFTPLTKFVNLSIPIEDPERETFKTTDDVTVVGFVLFFPNYSTFLGKPGFYVEDLFVRECYRRKGFGRMLLSAVATQAVKMGYGRVEWVVLDWNVNAIKFYEEMGADLLNEWRICRLTGEALQAYGGAH 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium930g00003 230 MobiDBLite consensus disorder prediction 1 20 - -
Vium930g00003 230 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 82 221 IPR000182 GO:0016747
Vium930g00003 230 Pfam Acetyltransferase (GNAT) family 122 206 IPR000182 GO:0016747
Vium930g00003 230 FunFam probable acetyltransferase NATA1-like 28 229 - -
Vium930g00003 230 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 29 221 IPR016181 -
Vium930g00003 230 CDD NAT_SF 128 188 - -
Vium930g00003 230 Gene3D - 28 229 - -
Vium930g00003 230 PANTHER DIAMINE N-ACETYLTRANSFERASE 28 226 - -
Vium930g00003 230 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium930g00003 Vium-Chr930 31397 32451 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium930g00003 Acetyltransf_1 3.4e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium930g00003 K22883 - gmx:100782562 380.563