Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9299g00006 ATGTCGGCGTCGGAGATTCTCCGGGAACTAGATTCACTGAAGGATGCAAAGGCAAAAATTGAGGATAAAATATCTGTGCTTGAAGCTCAACTCAGAGAGATTAATCTCCGAAACGACGCCGCACCCCCCAATGGCTCTTCTTATCCTTCTTCGTACCCCACAAACGGTTTGACGCAGGACATGATCCACAGATACAGTCGTCATCTTATGCTTCCTTCCTTTGGTGTTGAAGGGCAGGCAAATCTGTTGAAGTCATCGATTTTGGTTGTGGGAGCTGGTGGATTGGGTGCGCCTGCATTGTTATACTTTGCAGCTGCTGGTGTTGGGCGCTTGGGTATTGTTGATCATGACGTGGTTGAGCTGAATAATATGCATAGGCAGGTTATCCACACAGAAGCATATGTTGGTAAGCCAAAAGTGAAATCTGCCGCTGCTGCTTGTCTCTCGGTCAACTCCACTATTGAAGTTGTGGAACATGAAGAAGCTTTGCGGACTTCTAATGCTTTGGAAATTCTTAGCAAATATGATATAATCGTAGATGCAACAGATAATGCTCCTACCAGGTACTTGATCAGTGATTGCTGCGTGGTACTAGGAAAGCCTCTTGTCTCAGGTGCTGCATTGGGAATGGAGGGGCAGCTTACTGTCTACAATTACAAAGGTGGTCCGTGCTATAGATGCCTCTTTCCGTTGCCACCACCTAGAACGGCATGCCAAAGTTGTGCTGAGGGTGGAGTTCTTGGAGTAGTTCCTGGTATAATTGGCTGTCTCCAGGCTCTTGAGGCTATTAAGATTGCGGCTGCTGTTGGTGAACCACTCTCAGGAAGGATGCTTCTCTTGGATGCATTGTCTGGAAGGATTCGTATTGTCAAAATTAGAGGAAGGTCTATGCATTGTGAAGCATGTGGAGAAAATGCAACATTTACACAGCAGAAATTCCAAGAATTTGATTATGAGAAGTTCACCGAGACTCCCTTGCGTGTGCCTCCTTTGAAGTTACATCTACTTCCGAGTGAATCTAGAATCAGCAGCAAGGAATACAGTGAAATAATTCTTAAGAAGGAACCACATGTGCTGGTTGATGTTAGACCAGCTCACCATTTCAAGATTGTATCTCTACCGAAGTCCCTGAACATTCCACTCTCAACGTTAGAGTCTCGGCTACCTGAAATATCAGCAGCTTTGAAGAAAGAGGACAGTGGTCTAGTTTCTGGATCAGGTGCACAATTATATGTAGTGTGCAGAAGGGGAAATGATTCTCAAAGGGCTGTTCAGTGTCTTCACAAAATGGGTTTCACATCTGCCAAGGACATTGTTGGGGGCTTAGAGTCTTGGGCATACAACGTGGATCCCAAGTTCCCTACATATTAG 1371 0.4537 MSASEILRELDSLKDAKAKIEDKISVLEAQLREINLRNDAAPPNGSSYPSSYPTNGLTQDMIHRYSRHLMLPSFGVEGQANLLKSSILVVGAGGLGAPALLYFAAAGVGRLGIVDHDVVELNNMHRQVIHTEAYVGKPKVKSAAAACLSVNSTIEVVEHEEALRTSNALEILSKYDIIVDATDNAPTRYLISDCCVVLGKPLVSGAALGMEGQLTVYNYKGGPCYRCLFPLPPPRTACQSCAEGGVLGVVPGIIGCLQALEAIKIAAAVGEPLSGRMLLLDALSGRIRIVKIRGRSMHCEACGENATFTQQKFQEFDYEKFTETPLRVPPLKLHLLPSESRISSKEYSEIILKKEPHVLVDVRPAHHFKIVSLPKSLNIPLSTLESRLPEISAALKKEDSGLVSGSGAQLYVVCRRGNDSQRAVQCLHKMGFTSAKDIVGGLESWAYNVDPKFPTY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9299g00006 456 Pfam ThiF family 65 300 IPR000594 -
Vium9299g00006 456 CDD ThiF_MoeB_HesA_family 64 292 - -
Vium9299g00006 456 FunFam Adenylyltransferase and sulfurtransferase MOCS3 58 307 - -
Vium9299g00006 456 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 52 423 IPR035985 GO:0008641
Vium9299g00006 456 Coils Coil 3 37 - -
Vium9299g00006 456 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 27 456 IPR028885 GO:0002143|GO:0004792|GO:0005829
Vium9299g00006 456 SMART rhod_4 343 451 IPR001763 -
Vium9299g00006 456 Gene3D - 340 456 IPR036873 -
Vium9299g00006 456 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 60 305 IPR045886 -
Vium9299g00006 456 Pfam Rhodanese-like domain 345 446 IPR001763 -
Vium9299g00006 456 ProSiteProfiles Rhodanese domain profile. 353 454 IPR001763 -
Vium9299g00006 456 Gene3D - 58 309 - -
Vium9299g00006 456 FunFam Adenylyltransferase and sulfurtransferase MOCS3 340 456 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9299g00006 103 456 Sulfurtransferasese or Rhodanese AT5G55130 70.868 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9299g00006 K11996 - gmx:100814736 788.104