Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9252g00002 GCCTCCGACTTTAGGGTTTCGGAAAAGCTGCGCGTCGATCTACGAAATGGCGAGGATAAGGTGTACGAGCTGAGGAACAAGACGAAGGCGGAGCTGCTAAACCAGTTGAAGGATCTGAAGGCGGAGCTCGCTTTGCTTCGAGTGGCTAAGGTCACCGGCGGCGCCCCTAACAAGCTCTCGAAAATCAAGGTAGTGAGGCTTTCGATAGCGCAGGTGTTGACGGTTATTTCTCAAAAGCAGAAGGCAGCGCTCAGAGAGGCTTACAAGACAAAGAAGCTTTTGCCCCTTGACCTCCGTCCCAAGAAGACCCGCGCCATTCGCAGACGCCTTACCAAACACCAGGCATCATTGAAGACAGAACGGGAGAAGAAGAAGGAGCTTTACTTTCCACTAAGAAAGTATGCCATCAAAGTTTAA 417 0.5132 ASDFRVSEKLRVDLRNGEDKVYELRNKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKTKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYAIKV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9252g00002 138 PANTHER 60S RIBOSOMAL PROTEIN L35 20 138 IPR045059 GO:0000463|GO:0022625
Vium9252g00002 138 SUPERFAMILY Ribosomal protein L29 (L29p) 20 80 IPR036049 GO:0003735|GO:0005840|GO:0006412
Vium9252g00002 138 Coils Coil 22 49 - -
Vium9252g00002 138 CDD Ribosomal_L29_HIP 23 79 - -
Vium9252g00002 138 FunFam 60S ribosomal protein L35 93 138 - -
Vium9252g00002 138 Hamap 50S ribosomal protein L29 [rpmC]. 19 79 IPR001854 GO:0003735|GO:0005840|GO:0006412
Vium9252g00002 138 Gene3D - 18 92 IPR036049 GO:0003735|GO:0005840|GO:0006412
Vium9252g00002 138 Gene3D - 93 138 - -
Vium9252g00002 138 FunFam 60S ribosomal protein L35 18 92 - -
Vium9252g00002 138 Pfam Ribosomal L29 protein 23 79 IPR001854 GO:0003735|GO:0005840|GO:0006412
Vium9252g00002 138 NCBIfam 50S ribosomal protein L29 23 79 IPR001854 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9252g00002 Vium-Chr9252 10716 12014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9252g00002 20 138 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 89.076 6.06e-70 204