Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium924g00014 ATGGAACAAGAACTTGCTGCTCAAACTAGTGGAACGTTGTTAGCTCGTCAAGCCCATCAATTTCTGAGGAAGTGGTTAATTGGTCATCCAAAATTTGTGTCAAACGAAGTTTACATTGCTGGTGATTCATATTCTGGCATTCCCGTTCCAGCAATTGTTCAAGAAATTGCACAAGGTAATGAAAAAGGGTTTCCAAGGATAAATATCCAGGGGTACCTTTTGGGGAATCCGATGACAACTAGAAGGGACGGAAACTATGCAATCCCTTTTGCTCATGGAATGGCACTTATTTCTGATGAACTATTTGAGTCTCTACAAAAAAATTGTAAAGGAAACTACGTCGATGTGGACTCCGAAAATGTATTATGCTATAAAGATATGGACTCATTCCATAAGCTTGTATCAGGACTTTCTCATTACAATATTTTGGAACCGTTGTGTGAGTTCGATCATTCTACACCTCCTTTGAGAAGATCCCTAATTGAGAAATTTCCTGGCAAGCATTTCTTGAAAACTGATCTCAAATTGCCAGACGTAACATGTCCGACTTATACATCATTCCTATCTGCTTATTGGGCAAATGATGATAATGTTCGAACTGCACTTAATGTTCGCAAGGGAAGTATAGGAACATGGATTCGTTGTAATCATGATGAAGGTTTCAAGTCCGATATTTCAAGCAGCATTGAATACCACGCAAATCTTAGTAGAAAAGGCTATCGTTCATTAATATACAGTGGCGATCATGACATGGTGGTTCCTTTCTTGGGAACTCAAGAATGGATAAGATCTTTAAACTACTCTATTGTTGATGATTGGAGGCCATGGAATTCAAATGGACAAGTTGGAGGATACACAAGGACTTACTCTAATCAAATGACATTTGCAACTGTGAAGGGTGCGGGACACACAGCTCCGATGTACAAATCGAAAGAATGTTTTGACATGTTCAGCAGATGGATATCTAAGAGGGCTTTGTAG 981 0.3914 MEQELAAQTSGTLLARQAHQFLRKWLIGHPKFVSNEVYIAGDSYSGIPVPAIVQEIAQGNEKGFPRINIQGYLLGNPMTTRRDGNYAIPFAHGMALISDELFESLQKNCKGNYVDVDSENVLCYKDMDSFHKLVSGLSHYNILEPLCEFDHSTPPLRRSLIEKFPGKHFLKTDLKLPDVTCPTYTSFLSAYWANDDNVRTALNVRKGSIGTWIRCNHDEGFKSDISSSIEYHANLSRKGYRSLIYSGDHDMVVPFLGTQEWIRSLNYSIVDDWRPWNSNGQVGGYTRTYSNQMTFATVKGAGHTAPMYKSKECFDMFSRWISKRAL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium924g00014 326 Gene3D alpha/beta hydrolase 2 326 IPR029058 -
Vium924g00014 326 PRINTS Carboxypeptidase C serine protease (S10) family signature 25 50 IPR001563 GO:0004185|GO:0006508
Vium924g00014 326 PRINTS Carboxypeptidase C serine protease (S10) family signature 293 306 IPR001563 GO:0004185|GO:0006508
Vium924g00014 326 Pfam Serine carboxypeptidase 7 322 IPR001563 GO:0004185|GO:0006508
Vium924g00014 326 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 309 IPR001563 GO:0004185|GO:0006508
Vium924g00014 326 FunFam Carboxypeptidase 228 323 - -
Vium924g00014 326 SUPERFAMILY alpha/beta-Hydrolases 12 323 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium924g00014 Vium-Chr924 135725 149554 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium924g00014 188 326 Calmodulin-binding Proteins AT2G22960 64.748 3.98e-61 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium924g00014 K16296 - gmx:100792006 462.611