Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9239g00001 ATGGAAGCTGAAGCCAACTTCTTGGTTATTGTCATATCTCTCTTCTTTCTATGGAATTGGTTTGCAAAATATTACAAGCTAAAAGCTAACGACTCTCACAAACTACCCCCTGGTCCAAAGAAGCTACCTTTCATAGGCAACCTGCATCAACTATCAGGAGCAGGTTCACTTCCACATCGTGCTTTCTACAAGCTTGCTCATATATATGGACCTCTCATGCACCTCCAACTTGGTGAAATTTCTACAGTGGTTGCATCCTCGCCCGGCTTGGCCAAGGAAATAATGAAAACAAATGATACTGCTTTTGCGCAGAGACCTCAATTTGTTTTCGGTGACATTTTGTCCTATGGAGGAAAGAATATTGTTTTTGCTCCATATGGTGATTACTGGAGACAAATAAAAAAAATATCTGTGTTGGAGCTTCTAAGCGCCAAAAGGGTCAAGTCTTTCTCTTTCATCAGAGAAGAGGAGACGGCAAAGTTTATAGATTCAATTCGAAAATCAGCAGGTTCACCCGTCAATCTTACTGCTAAAATTTACTCCTTGATGAGTGATTTTGTTTTCAGGGCAGCTTTTGGTAGAAAATATAAGGACCAAGAATTTGTTGTGCCTCTGATGCGAAGAGTAATAGAAGAAGCGGCAGGATTTAGTTTTGTCGATCTCTTTCCTTCGTTGAAATTCATACATTTCATAACTGGGAAGAGGGCAAAATTGGAGCAGCTGCAGAAGCAGGTTGACAAGGTATTGGATAACGTTGTGAAAGAACATGAAGAAAAACGAAAAGAGGCAAAAGAAGACGGCGTTGAAGTGGAGGATGAGGATTTTGTCGACGTTCTTCTCAGAATTCAACAAAATGACAATCCCGACTTCAAGATGACGACGACACAAATCAAAGCTTTGATATTGGATATATTTGTGGCGGGAACTGATACTTCAGCGTCAGTATTAGACTGGATAATGGCAGAAATAGTGAAAAACCCAAGAGTGATGGAGAAAGCACAAAGCGAGATAAGAGAAGCATTTAGAGAAAAGGAAAGAATTGGTGAAAGTGATGTAGAGGAGCTTAATTATTTGAAGTTGGTGATGAAAGAAACGTTGAGGTTACACCCACCAGCTCCTTTGTTGCTCCCTAGAGAATGCAGTGAAGTAAGAAAGCTTGGTGGATACGAAATACCGAAAAAGACGAGAGTTATGATAAACGCATGGAGTATTGGAAGAGATCCTGAATATTGGAGTGATGCTGAGAGGTTTATACCAGAGAGATTCGAAGGTAACTGCGTGGATTTCAAAGGGAATAACTATGAGTATGTGCCATTTGGGGCAGGAAGGAGAATGTGCCCAGGCATGGCATTTGGTTTGGCAAGCATTATGCTTCCGCTGGCTCTCTTACTCTATCACTTCAACTGGGAACTACCAGATAACATGAAAGCTGAGAATATGGATATGGCTGAACACTTCGGAGTCGTTATTAGTAGGGAAAACCAGTTGCTTTTAATTCCCTCTCTTTATCATCCCTGA 1518 0.4097 MEAEANFLVIVISLFFLWNWFAKYYKLKANDSHKLPPGPKKLPFIGNLHQLSGAGSLPHRAFYKLAHIYGPLMHLQLGEISTVVASSPGLAKEIMKTNDTAFAQRPQFVFGDILSYGGKNIVFAPYGDYWRQIKKISVLELLSAKRVKSFSFIREEETAKFIDSIRKSAGSPVNLTAKIYSLMSDFVFRAAFGRKYKDQEFVVPLMRRVIEEAAGFSFVDLFPSLKFIHFITGKRAKLEQLQKQVDKVLDNVVKEHEEKRKEAKEDGVEVEDEDFVDVLLRIQQNDNPDFKMTTTQIKALILDIFVAGTDTSASVLDWIMAEIVKNPRVMEKAQSEIREAFREKERIGESDVEELNYLKLVMKETLRLHPPAPLLLPRECSEVRKLGGYEIPKKTRVMINAWSIGRDPEYWSDAERFIPERFEGNCVDFKGNNYEYVPFGAGRRMCPGMAFGLASIMLPLALLLYHFNWELPDNMKAENMDMAEHFGVVISRENQLLLIPSLYHP 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9239g00001 505 Gene3D Cytochrome P450 28 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 FunFam Cytochrome P450 71D8 28 500 - -
Vium9239g00001 505 Coils Coil 330 350 - -
Vium9239g00001 505 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 Pfam Cytochrome P450 36 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 Coils Coil 231 273 - -
Vium9239g00001 505 CDD CYP71-like 69 496 - -
Vium9239g00001 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Vium9239g00001 505 PANTHER OS08G0105600 PROTEIN 61 503 - -
Vium9239g00001 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9239g00001 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9239g00001 Vium-Chr9239 3844 5474 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9239g00001 35 502 Cytochrome P450 AT5G25120 43.487 7.66e-141 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9239g00001 - K15472 gmx:100785715 672.159