Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium922g00028 ATGATACAGAATGGTTGCATTATATCCCAAGGGTATGCCCCTGTGAATTCTAGGTCACGCAATCATGTCGTACCCAGCAGCTCTGTGGTTCGATGTGCTTCTGGAATGTCTGCTAAGGTTGCCGTTTCAAACATCCGGAGCTTTTCGCGACATAATTTAGAATGTAAATCCCCGTTTCCAGGAGGAATGGCATTTTCAAACGTGTTTGCTGCATCAAGCTTGCGTTTAAGTGAGGGTCAAAATCTTCTCTTTCGCTCTTTCCCTGGGTTACCCAAATTAGCGAAGTCCAATATGGTCACTAGAGCATCAAAGGATGTCCCAACTAGCTTCCGTTACCCTCCAATGACCAAAAAACCGCAATGGTGGTGGAGATCATTAGCATGCCTACCTTACCTTATGCCTCTCCATGAGACATGGATGTATGCTGAGACAGCATATAATCTTCATCCATTTTTGGAATGTTTTGAATTCTACACGTACCCTTTTCTTATGGCAATTGGGAGCCTACCTAGCTGGTTTCTCATGGCATACTTCTTTGTTGCATATCTTGGAATTGTGAGGAGAAAAGAATGGCCACATTTCTTCAGATTTCATGTCGTGATGGGAATGTTATTGGAGATTGCCCTGCAGGTTATAGGAACTGTGAGCCGCTGGATGCCATTATCACTCTACTGGGGCAAAATGGGAATGCATTTCTGGACTGCCGTATCATTTGGTTATCTCTTTACTGTTTTGGAGTGCATAAGGTGTGCTCTTGTTGGTATGTATGCTGACATTCCTTTCATCTGTGATGCAGCATATATCCAAATTCCATACGATTAA 822 0.4331 MIQNGCIISQGYAPVNSRSRNHVVPSSSVVRCASGMSAKVAVSNIRSFSRHNLECKSPFPGGMAFSNVFAASSLRLSEGQNLLFRSFPGLPKLAKSNMVTRASKDVPTSFRYPPMTKKPQWWWRSLACLPYLMPLHETWMYAETAYNLHPFLECFEFYTYPFLMAIGSLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSLYWGKMGMHFWTAVSFGYLFTVLECIRCALVGMYADIPFICDAAYIQIPYD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium922g00028 273 NCBIfam Tic20 family chloroplast protein importer 1 273 IPR005691 -
Vium922g00028 273 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 27 273 IPR005691 -
Vium922g00028 273 Pfam Chloroplast import apparatus Tic20-like 96 266 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium922g00028 Vium-Chr922 175278 177400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium922g00028 88 273 Chloroplast and Mitochondria Gene Families AT4G03320 41.799 8.61e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium922g00028 - - gmx:100818669 510.375