Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium922g00022 ATGTCAAAGAAAATCTCGAAATCCCTGAGAGATTATCTCATCAAAATCAAACCCCAACGTTCCATGGTTCAATTATCCTCTAAGAAATGGGTCCCCAAAGGTTGCAAGCATCCTAGGACTTCTTCTATCGACATGGACAGCAACAAAAACATCACCAAAAAAAACACCACCAACGCCAAGGACGACGAAGCCATGTTAGCAGACATTGATCGCTTTCTCATCGAGAATTTCAAGAACCTATTCCTCGATCGTGAAGAAACCACCACCAACAATGAATCCAAAGAACAAAATTCTCCCAAACTAGACTCTGTCAGATTTGACTCTTCTCTAAGGTTCGATGATTCGCCACTGAACCTCTACACAGACACAACAACCGAAGCAGGACTATCCAGTTTGACCATGTCTGAGCCCGAGAGCACGGAGGAACAAACCACCGTTCTGAGTAATTGCGTGGTGGTTTTGGCCAACTCCGCCAGACCCACCGAGGATTTCCGTCGGTCCATGGAGGGCATGGTTGAAGCAAGATTGAAGAAGAGTGAAAAGGTAGATTGGGGCTTCATGCAGGAGCTTTTGTTCTGTCACATGAATCTGAACCAGAAGAAGTGGCACAAGTTCATTCTCAGCGCCTTCGTGGATATCGCCACCACCCTCCGCCAGACACCGGAGATTTCTCCGGCGAACCCCCAGCCGCCGCGGAGCGTTCGGACTGTTAGAATCGGAAGAGAAGTGAGGAAGAAGACAAAGGAAGCAATCACCTTGGAATTTGGGTCACCCTAA 777 0.4775 MSKKISKSLRDYLIKIKPQRSMVQLSSKKWVPKGCKHPRTSSIDMDSNKNITKKNTTNAKDDEAMLADIDRFLIENFKNLFLDREETTTNNESKEQNSPKLDSVRFDSSLRFDDSPLNLYTDTTTEAGLSSLTMSEPESTEEQTTVLSNCVVVLANSARPTEDFRRSMEGMVEARLKKSEKVDWGFMQELLFCHMNLNQKKWHKFILSAFVDIATTLRQTPEISPANPQPPRSVRTVRIGREVRKKTKEAITLEFGSP 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium922g00022 258 ProSiteProfiles OVATE domain profile. 153 216 IPR006458 -
Vium922g00022 258 Pfam Transcriptional repressor, ovate 157 217 IPR006458 -
Vium922g00022 258 NCBIfam uncharacterized plant-specific domain TIGR01568 151 218 IPR006458 -
Vium922g00022 258 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 57 217 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium922g00022 Vium-Chr922 135567 136505 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vium922g00022 Ovate 4.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium922g00022 - - var:108320446 377.096