Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium922g00013 ATGATGGATTTCTGGCCAGAATTTCTTGCAAGCAGTTCTGGAAGAGAGTTTGTAGCTGGTGGTTTTGGAGGCATCGCGGGTATAATTGCAGGTTATCCACTTGACACACTCCGCATCAGATTGCAGAACACAAAAAATGGCTCTGCTTTCACCATCTTTAAGCACATGGTGATAAGGGAAGGAACAACTTCTTTGTACCGCGGCATGGCCGCACCATTAGCCTCTGTTACTTTTCAGAATGCAATGGTTTTCCAAACGTACGCGGTTCTGTCAAGGGCATGTGACCCATCTGTTTCTCCGAAAGACCCTGCTTCCTATAAGGGTGTTGCATTAGGAGGAACAGGTACCGGAGCACTTCAAAGTCTGTTACTTTCCCCTGTAGAGTTGATCAAAATTCAACTTCAACTGCAGAAAGAAAGCCAGATGACAGAATCCATAAAGGGTCCTATAAAGCTGGCTAAAAACATTTGGAGGAAAGAAGGCCTTCGAGGCATTTATCGAGGACTTGGTGTGACTGTGATGAGGGATGGACCCTCTCATGGTTTATACTTCTGGACATATGAATACATGAGGGAACGACTTCACCCTGGTTGCAGAAAAAGTGGTGAAGAAAGTTTGAAGACTATGTTAGTAGCGGGAGGAACAGCAGGGGTGGCTAGCTGGATCAGTTGCTACCCTTTGGATGTTGTAAAGAGTAGATTACAGGCTCAAACATCCTCTTCTCTCAAGTACAATGGCATCGTAGATTGTTTCAGAAAGAGTGTTCACCAAGAAGGATACAGTGTGCTATGGCGGGGTTTAGGAACTGCAGTTACCAGAGCTTTCATAGTAAATGGGGCCATTTTCTCGGCTTATGAGATTGCACTAAGATTACTGTTTCACAACGCAATTCATACGAAAGAAACTATTTAG 912 0.4441 MMDFWPEFLASSSGREFVAGGFGGIAGIIAGYPLDTLRIRLQNTKNGSAFTIFKHMVIREGTTSLYRGMAAPLASVTFQNAMVFQTYAVLSRACDPSVSPKDPASYKGVALGGTGTGALQSLLLSPVELIKIQLQLQKESQMTESIKGPIKLAKNIWRKEGLRGIYRGLGVTVMRDGPSHGLYFWTYEYMRERLHPGCRKSGEESLKTMLVAGGTAGVASWISCYPLDVVKSRLQAQTSSSLKYNGIVDCFRKSVHQEGYSVLWRGLGTAVTRAFIVNGAIFSAYEIALRLLFHNAIHTKETI 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium922g00013 303 Pfam Mitochondrial carrier protein 111 194 IPR018108 -
Vium922g00013 303 Pfam Mitochondrial carrier protein 13 92 IPR018108 -
Vium922g00013 303 Pfam Mitochondrial carrier protein 209 295 IPR018108 -
Vium922g00013 303 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Vium922g00013 303 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
Vium922g00013 303 PRINTS Mitochondrial carrier protein signature 213 235 IPR002067 GO:0055085
Vium922g00013 303 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Vium922g00013 303 Gene3D Mitochondrial carrier domain 13 301 IPR023395 -
Vium922g00013 303 SUPERFAMILY Mitochondrial carrier 15 286 IPR023395 -
Vium922g00013 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 291 IPR018108 -
Vium922g00013 303 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 11 292 - -
Vium922g00013 303 FunFam Mitochondrial arginine transporter BAC2 12 302 - -
Vium922g00013 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 93 IPR018108 -
Vium922g00013 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 193 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium922g00013 Vium-Chr922 74886 76980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium922g00013 2 296 Antiporters AT1G79900 70.608 1.09e-143 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium922g00013 K15109 - gmx:100812056 489.96