Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium922g00012 ATGAACAGACAGGGCCAGAGATCCGGTGCGACGGGGGTGCACCATAACCGCCAGCACTCCGAGCACTATCTCGATGCTTCTTCCAAGTGGTTCAACTCCTCCTCCAATCACATTCCTCCTCTTCAGGACTACAATCTGTACGGTGGCGGAGGCAGAATGTACCGGAACAGCGTGCAGAAGAACTTCAGTGAGTATTCTATGGATCCGTTAACGCCTCCTCGTAGTTATGCCGTTAAGAAAAACGGTGACGAGGACGATTCTCCTCGCGATTTCAGCCCTGGCCTCTTGGATATCCATTCCTTCGATACAGAGCTTCTTCCTCAGATTCCGTCCTCGAACGCGTATGATTCCGAGCCTTACATTTTCAGCAAACAAACTAGCAGAACTCGTGCTATTGATAACAACGTCTACAATAGTCTTGCCGCCGCAGAGAATCTGAAGTCTAGCAATGTAGCTAAGATTAAAGTCGTGGTTCGCAAGAGACCGCTAAATAAGAAGGAGACAGCTAAGCATGAGGAGGATATTATAGACACAGTTTCAAATTCTTTAACCGTGCACGAGACCAAACTTAAGGTTGATTTAACTCAGTATGTTGAGAAGCATGAGTTTGTTTTTGATGCTGTTTTGAATGAAGAGGTTACAAATGACGAGGTGTATCGTGAAACAGTGGAGCCCATAGTTCCAATAATATTTCAACGCACTAAGGCAACTTGCTTTGCGTATGGTCAAACAGGAAGTGGAAAAACTTACACAATGAAGCCACTACCTCTTAAAGCATCAAGGGACATCTTGAGATTGATGCATCATACGTACAGGAGTCAGGGATTTCAGTTGTTTGTGAGTTTCTTTGAAATATATGGTGGGAAGCTTTTTGATCTCCTTAATGACCGAAAAAAACTGTGCATGAGGGAGGATGGCAAGCAACAAGTTTGCATTGTTGGTTTGCAAGAGTACCAAGTATCGGATGTAGAGACCATCAAGGAACTGATTGAGCAAGGAAATGCCACAAGAAGTACTGGCACCACAGGTGCAAACGAGGAGTCCTCACGGTCACATGCAATTCTTCAGCTTGCTATCAAGAGATCAGTTGATGGAAATGTATCCAAGCCTCCCCGAGTTGTTGGGAAGCTTTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACCACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAGATCAATAAGAGCTTGCTCGCCTTAAAGGAATGCATAAGAGCTCTAGATAATGACCAAGGACACATCCCATTCAGAGGCAGCAAATTGACTGAAGTTCTGAGGGATTCATTTGTTGGTGATTCCCGCACTGTTATGATATCTTGCATATCACCAAGTTCCGGTTCATGTGAACATACTCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCTTATCCAAAGGGAACAATTCTAAGAAGGACGTTTTATCTTCAAATTTCAACCTTAAAGATTCAATTACTATTCCCTTGTCTTCTGTTAATACATATGCTTATGAGGATCGCACAACTGATACATGGCCTGAAGAAAAAGACGGGGATGAATTTAGTCCTCCTGAAGATTACTATGAACAGGTGAAACCATCTTGGAAGAAAAATGGAAAGATAGAGCCATATGGTGTAACAGATGACAAATTTAAGAAACCCCCCAATGGCCAGATTAAATGGAAGGACATCCCAAAAGTTGAACCTAAAACAGTACAGCCTGATGATGATTTGAATGCCCTCTTACAGGAAGAAGAAGACCTTGTAAATGCTCACCGGAAACAAGTAGAGGAAACCATGAATATTGTTAGAGAGGAAATGAACCTCTTGGTTGAAGCAGACAAACCAGGTAATCAGCTGGATGATTATATAGCAAAACTAAATGCCATTCTGTCTCAGAAGGCAGCTGGCATCATGCAGTTACAAACCCGTTTAACTCATTTCCAGAAACGTTTAAAGGAGCATAGCGTTCTGGCTTCTTCTGCTGGTTACTAA 2010 0.4279 MNRQGQRSGATGVHHNRQHSEHYLDASSKWFNSSSNHIPPLQDYNLYGGGGRMYRNSVQKNFSEYSMDPLTPPRSYAVKKNGDEDDSPRDFSPGLLDIHSFDTELLPQIPSSNAYDSEPYIFSKQTSRTRAIDNNVYNSLAAAENLKSSNVAKIKVVVRKRPLNKKETAKHEEDIIDTVSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRSQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYQVSDVETIKELIEQGNATRSTGTTGANEESSRSHAILQLAIKRSVDGNVSKPPRVVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNFNLKDSITIPLSSVNTYAYEDRTTDTWPEEKDGDEFSPPEDYYEQVKPSWKKNGKIEPYGVTDDKFKKPPNGQIKWKDIPKVEPKTVQPDDDLNALLQEEEDLVNAHRKQVEETMNIVREEMNLLVEADKPGNQLDDYIAKLNAILSQKAAGIMQLQTRLTHFQKRLKEHSVLASSAGY 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium922g00012 669 ProSitePatterns Kinesin motor domain signature. 375 386 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vium922g00012 669 Gene3D Kinesin motor domain 129 479 IPR036961 -
Vium922g00012 669 PANTHER KINESIN-RELATED PROTEIN 6 530 664 IPR027640 GO:0003777|GO:0007018
Vium922g00012 669 MobiDBLite consensus disorder prediction 515 534 - -
Vium922g00012 669 ProSiteProfiles Kinesin motor domain profile. 153 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium922g00012 669 SMART kinesin_4 151 482 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium922g00012 669 FunFam Kinesin-like protein 133 479 - -
Vium922g00012 669 CDD KISc_KIF2_like 153 474 - -
Vium922g00012 669 Coils Coil 587 618 - -
Vium922g00012 669 MobiDBLite consensus disorder prediction 78 92 - -
Vium922g00012 669 MobiDBLite consensus disorder prediction 1 21 - -
Vium922g00012 669 PRINTS Kinesin heavy chain signature 342 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium922g00012 669 PRINTS Kinesin heavy chain signature 376 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium922g00012 669 PRINTS Kinesin heavy chain signature 426 447 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium922g00012 669 PRINTS Kinesin heavy chain signature 233 254 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium922g00012 669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 476 IPR027417 -
Vium922g00012 669 MobiDBLite consensus disorder prediction 65 92 - -
Vium922g00012 669 Pfam Kinesin motor domain 159 475 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium922g00012 Vium-Chr922 68112 73836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium922g00012 152 476 Calmodulin-binding Proteins AT5G65930 33.731 2.99e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium922g00012 K10393 - gmx:100802651 1236.48