Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9224g00009 ATGGCGAAGGAGGAAAAGGAGATAGTGATGGAGCTTCTCCCTCTCATTCGAGTGTACAAAGATGGCACGGTGGATCGTCTTCTGAGCTCTCCAAACGTCCCAGCCTCCCTCGAAGACCCTGAAACTGGAGTCTCATCAAAAGACATAGTAATAGCAGACAACCCTTTGGTCTCTGCTCGCGTTTTCCTTCCCAAAAACCACAACAATCCCTCCCACAAACTTCCCATCTTTGTCTACTTCCACGGCGGCGCCTTCTGCGTTGAATCGGCTTTCTCCTTTTTCGTCCATCGCTATCTCAACATCTTAGTCTCCCAAGCCAACGTAATCGCCATCTCCGTTGACTTCAGACTCCTGCCGCACCACCCTCTTCCTGCAGCCTACCAAGATGGCTGGACCACTCTCCAGTGGATCGCTTCCCACGCCACCAATACCGCCGCCAACCCCGAGCCATGGTTACTCCACTACGCCGATTTCAACAAACTCTACGTAGGAGGCGAAACCAGCGGTGCTAACATCGCACACAACTTGCTTCTTCGTGCAGGGGAGGAGTCTCTGCATGGGGATCTCAAGATATTCGGTGCAGTGCTGAGCTCTCCCTTTTTCTGGGGCTCAAAGCCAATTGGGTCGGAGCCTGTCGAAGGGCACGAGCAGAGTTTGGCCATGAAAGTTTGGAGCTTGGCGTGCCCTGATGCTCCTGCTGGAATCGATAATCCCTGGATCAACCCTTGTGTCACTGGGGCACCCTCTTTGGCCACACTTGCGTGTTCTAAGATTCTGATCACCATCACCGGAAAAGACGAGTTCAGAGACAGAAATATTTTGTACCACGACACCATAAAGGAAAGTGGATGGCAGGGAGAAGTTGAATTGTTTGATGCTGGCGATGAAGAACATGCTTTCCAACTCTTCAAGCCTGAAACTGATAGAGCTAAAGCCATGATCAAACACTTGGCTTCGTTTCTGCTCTGA 969 0.5129 MAKEEKEIVMELLPLIRVYKDGTVDRLLSSPNVPASLEDPETGVSSKDIVIADNPLVSARVFLPKNHNNPSHKLPIFVYFHGGAFCVESAFSFFVHRYLNILVSQANVIAISVDFRLLPHHPLPAAYQDGWTTLQWIASHATNTAANPEPWLLHYADFNKLYVGGETSGANIAHNLLLRAGEESLHGDLKIFGAVLSSPFFWGSKPIGSEPVEGHEQSLAMKVWSLACPDAPAGIDNPWINPCVTGAPSLATLACSKILITITGKDEFRDRNILYHDTIKESGWQGEVELFDAGDEEHAFQLFKPETDRAKAMIKHLASFLL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9224g00009 322 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 77 93 IPR002168 GO:0016787
Vium9224g00009 322 Gene3D alpha/beta hydrolase 4 322 IPR029058 -
Vium9224g00009 322 SUPERFAMILY alpha/beta-Hydrolases 7 321 IPR029058 -
Vium9224g00009 322 PANTHER ARYLACETAMIDE DEACETYLASE 12 307 - -
Vium9224g00009 322 FunFam Probable carboxylesterase 12 15 322 - -
Vium9224g00009 322 Pfam alpha/beta hydrolase fold 77 301 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9224g00009 Vium-Chr9224 80578 81701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9224g00009 5 321 Carbohydrate Esterase AT1G19190 36.875 2.31e-74 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9224g00009 - K13258 gmx:547489 547.354