Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9211g00004 ATGGCAAATGAACCTGTCTCTTCGGCACTTCTGGATTATGGAATGTGTTATTTTAATGATGTATTAGTGTTAAGAGCGAAGCTGTGTTCATTGGAAGCAACTGCACGCTTATGCAGGCTAATATCAGATTTGGTGGTTGTAATAGTTTCAGCAGCTATTGCTGGGATTGTCTTTTCTTGTTTGGGACAACCGGTTATCGTGGGCTATCTTCTTGCAGGCTCACTTATTGGACCTGGCGGTTTGAAATTTATTAGTGAAATGGTGCAGGTTGAGACTGTTGCACAATTTGGTGTAGTGTTTCTTCTCTTTGCTTTGGGGCTGGAATTTTCCTTGGCAAAGTTAAAAGCTGTGGGGGCTGTTGCTGTTCTTGGAGGACTACTTCAAATTGTCATTTTTATGTTCATGTGTGGCATTCTTTCCATGTTATTTGGAGCCTCATTGTCTGAGGGTGTTTTTGTGGGTTCCTTTCTGTCCATGTCATCAACAGCAGTAGTGGTGAAGTTTTTGGTGGAGCGAAATAGTAGTAATGCTCTTCATGTTCAAATTACAATTGGGACTCTTATTTTTCAGGATTGTGCAGTGGGTTTACTATTTGCTTTGCTCCCAGTTTTGGGTGGTAACAGTGGCCTTTTGCAAGGAATAATGTCAATGGGGAGACTGCTGCTAGTGTTGTCTTTGTACATCACTGCTACATCCATATTGTCATGGTCATTTGTTCCTCGGTTTCTTAAACTTATGATGCGGCTATCATCTCAGACTAATGAACTTTATCAGCTTGCTGCTGTTGCTTTCTGCTTGTTATCTGCATGGTGCAGTGATAAGCTAGGCCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGATTTCCACAACAGACTTCGGTCAACATACTTTGGACCAGGTGGAACCAATTCGTAACCTATTTGCAGCTCTCTTTCTCTCGAGTATTGGAATGCTTATACACGTGCAATTCCTTTGGAACCATGTGGATATCCTGCTGGCATCTGTTATTCTGGTTGTAGTCGTTAAAACTGCTGTTGTTGCTATAGTCACCAAGGCCTTTGGTTATAGCCTTAAGACGGCATTTATTGTTGGTATCTCGCTTGCCCAAATAGGTGAATTTGCTTTTGTCCTCCTGAGTCGTGCTTCAAATCTTCACCTTGTTGAGGGGAAAATGTATCTTCTTCTTCTAGGGACAACGGCTCTCAGTCTGGTTACAACTCCACTTTTGTTTAAATTGATACCTGCTGTCATGAATCTCGGTGTTCTCATGCACTGGTTCCCCTCTGAAAGTACAACACAAATTGAGGGGAAAGTATCTGTGAATGAAGCAAGCAGAATGTTATGA 1353 0.4198 MANEPVSSALLDYGMCYFNDVLVLRAKLCSLEATARLCRLISDLVVVIVSAAIAGIVFSCLGQPVIVGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLAKLKAVGAVAVLGGLLQIVIFMFMCGILSMLFGASLSEGVFVGSFLSMSSTAVVVKFLVERNSSNALHVQITIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIMSMGRLLLVLSLYITATSILSWSFVPRFLKLMMRLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFGQHTLDQVEPIRNLFAALFLSSIGMLIHVQFLWNHVDILLASVILVVVVKTAVVAIVTKAFGYSLKTAFIVGISLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPAVMNLGVLMHWFPSESTTQIEGKVSVNEASRML 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9211g00004 450 Pfam Sodium/hydrogen exchanger family 45 414 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vium9211g00004 450 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 38 444 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vium9211g00004 450 Gene3D - 38 422 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9211g00004 Vium-Chr9211 15728 23755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9211g00004 19 445 Antiporters AT5G51710 78.923 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9211g00004 K26735 - gmx:100799476 684.871