Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9211g00003 ATGTGTTATGGAAGTGAGGATCACATCTACAGTGCGCAGGATATTTCAGAGGGTGGTGTGGATGGTGCCATTCTCATTTGTCAGGGGAAGGTTTTTTTAGTAGGTTGTCTGCTATTCTCACTGTTTTTTTCATCTTTAACAGAATCTGACAAAAGCAGCTTCAATAGCAGTGTAGCAGATCAGCAGGCTGTATTGGAGACTGTAGCTAAAATTACTCATGAGAAATCAAAGAGAAATGATACACATGAGGGAAATGCTACGAGAGCATTTCAGTTTCAGGATGTGTTCTCACTGGAAAATGAAGATTCCGATGATGTGACAACTTTGATCGATAAAAAGGACAATGTCTTCGTCATGTCTAACAAGAAATCCAAATATCCTGTGCTTCAAGTGGATTTGAGGCTAATATCAGATTTGGTGGTTGTAATAGTTTCAGCAGCTATTGCTGGGATTGTCTTTTCTTGTTTGGGACAACCGGTTATCGTGGGCTATCTTCTTGCAGGCTCACTTATTGGACCTGGCGGTTTGAAATTTATTAGTGAAATGGTGCAGGTTGAGACTGTTGCACAATTTGGTGTAGTGTTTCTTCTCTTTGCTTTGGGGCTGGAATTTTCCTTGGCAAAGTTAAAAGCTGTGGGGGCTGTTGCTGTTCTTGGAGGACTACTTCAAATTGTCATTTTTATGTTCATGTGTGGCATTCTTTCCATGTTATTTGGAGCCTCATTGTCTGAGGGTGTTTTTGTGGGTTCCTTTCTGTCCATGTCATCAACAGCAGTAGTGGTGAAGTTTTTGGTGGAGCGAAATAGTAGTAATGCTCTTCATGTTCAAATTACAATTGGGACTCTTATTTTTCAGGATTGTGCAGTGGGTTTACTATTTGCTTTGCTCCCAGTTTTGGGTGGTAACAGTGGCCTTTTGCAAGGAATAATGTCAATGGGGAGACTGCTGCTAGTGTTGTCTTTGTACATCACTGCTACATCCATATTGTCATGGTCATTTGTTCCTCGGTTTCTTAAACTTATGATGCGGCTATCATCTCAGACTAATGAACTTTATCAGCTTGCTGCTGTTGCTTTCTGCTTGTTATCTGCATGGTGCAGTGATAAGCTAGGCCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGATTTCCACAACAGACTTCGGTCAACATACTTTGGACCAGGTGGAACCAATTCGTAACCTATTTGCAGCTCTCTTTCTCTCGAGTATTGGAATGCTTATACACGTGCAATTCCTTTGGAACCATGTGGATATCCTGCTGGCATCTGTTATTCTGGTTGTAGTCGTTAAAACTGCTGTTGTTGCTATAGTCACCAAGGCCTTTGGTTATAGCCTTAAGACGGCATTTATTGTTGGTATCTCGCTTGCCCAAATAGGTGAATTTGCTTTTGTCCTCCTGAGTCGTGCTTCAAATCTTCACCTTGTTGAGAATTTGAGTGAAGAAGCCTCCGACTTTGGAAATGAACATCCTACGTCGGAACCATAG 1515 0.4158 MCYGSEDHIYSAQDISEGGVDGAILICQGKVFLVGCLLFSLFFSSLTESDKSSFNSSVADQQAVLETVAKITHEKSKRNDTHEGNATRAFQFQDVFSLENEDSDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIAGIVFSCLGQPVIVGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLAKLKAVGAVAVLGGLLQIVIFMFMCGILSMLFGASLSEGVFVGSFLSMSSTAVVVKFLVERNSSNALHVQITIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIMSMGRLLLVLSLYITATSILSWSFVPRFLKLMMRLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFGQHTLDQVEPIRNLFAALFLSSIGMLIHVQFLWNHVDILLASVILVVVVKTAVVAIVTKAFGYSLKTAFIVGISLAQIGEFAFVLLSRASNLHLVENLSEEASDFGNEHPTSEP 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9211g00003 504 Pfam Sodium/hydrogen exchanger family 140 486 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vium9211g00003 504 Gene3D - 133 492 IPR038770 -
Vium9211g00003 504 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 48 486 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9211g00003 Vium-Chr9211 7890 16462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9211g00003 49 486 Antiporters AT5G51710 82.648 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9211g00003 K26735 - gmx:100810302 726.472