Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium918g00012 ATGACCCAAAGAGAGGAAGTTGTGCTTGATTTTGAAGACAACAATGGCCGCAGCAACAGCAAAGATGAAAATTCAGCATCGAAAGGTGTTGTCAACGGTCAAAGTGACAAGCTTCGTCAAGACTTGCAGGAAAAGCGCAGAGGCAGTGAATCAACAAGAAAGAAAAAGCAGGATCAGCAAAAAACCGAAGAAAGCCACCTCCAAACTTCACATTCACAAGAAAGCGTGGTGAGGTCTTCTTCGAACAATTCAACTCCACGATTCTCGTGGAAATCATCAATAAGCAGAACAAAGTCTCGGCTGATAGACCCTCCTGAGGAATCATGCGCAAATTCAGAATCAAGTGAACAAAAAGCGGCAGAAAATGATGACAGTGTTGAGGACATGCCTGAAATTTACAAGAAAACGAGGTTCAGTGCGTTCTCGCTGCTTCAGTGGCTATGTCTGGCCTTAATAATCGTAGCCTTGCTTTCAAACATTTGGATATCGTGCTTGCAAAAACTCAAACTCTGTGGCTTTCCCCTGTGGGAATGGGAGACAATGATTTTGGTTATTCTTTGTGGGCGTTTGCTCTCAGGTTGGATAATCAAGCTAATCGTCTTCTTCGTGGAACGCAATTTCATACTGCGAAAACGAGTGCTGTATTTTGTGTACGGTTTGAAACACTCGGTGAAAAACTGTGTCTGGTTGGGTCTTGTTCTGCTGGTGTGGCATTTTCTTTTGGTCAACGCGGTGAAGAAAAAGGTCAACGACAGGATTTTGTCGTGTGTGACAAAGGTTGTGGTGTGTCTGTTCATCGGCACTCTTTTGTGGCTCCTTAAAACGATCCTCGTGAAGNCTTCGGTTCGTCATCTAATGTGGAACATAACACCCAGTTCTTACCAGTCCGAGACAGGGATAACTATTTGA 909 0.44 MTQREEVVLDFEDNNGRSNSKDENSASKGVVNGQSDKLRQDLQEKRRGSESTRKKKQDQQKTEESHLQTSHSQESVVRSSSNNSTPRFSWKSSISRTKSRLIDPPEESCANSESSEQKAAENDDSVEDMPEIYKKTRFSAFSLLQWLCLALIIVALLSNIWISCLQKLKLCGFPLWEWETMILVILCGRLLSGWIIKLIVFFVERNFILRKRVLYFVYGLKHSVKNCVWLGLVLLVWHFLLVNAVKKKVNDRILSCVTKVVVCLFIGTLLWLLKTILVKXSVRHLMWNITPSSYQSETGITI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium918g00012 302 MobiDBLite consensus disorder prediction 69 90 - -
Vium918g00012 302 MobiDBLite consensus disorder prediction 102 126 - -
Vium918g00012 302 MobiDBLite consensus disorder prediction 1 90 - -
Vium918g00012 302 MobiDBLite consensus disorder prediction 20 37 - -
Vium918g00012 302 Coils Coil 39 59 - -
Vium918g00012 302 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 21 280 IPR016688 -
Vium918g00012 302 MobiDBLite consensus disorder prediction 38 68 - -
Vium918g00012 302 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium918g00012 Vium-Chr918 68560 69558 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium918g00012 51 279 Mechanosensitive Ion Channel Family AT2G17010 45.833 9.31e-63 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium918g00012 K22048 - vum:124824048 583.178