Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9122g00009 ATGACACGTCATTTCCTCCTTTCTCTGTTATTATTTGCGTCCACACTCTCTCGTCTCGTCCTAACTGTCACCGCCGGCCACGCTTCCGGTTTCACTTCCGGTGACGCTTCCGGTGACACCGACTTCATTCGCGAAAGCTGCAACGCAACGTTGTACCCTGACCTATGCTTCTCCTCGCTCTCTCGCTACGCCGCCGCGGTGCAACGTAGCCCCGGCGGCCTCGCGCGGGTGGCCGTGGCCGTGGCGCTTGCTAAGGCGCACGGCGCGGCGGCCTATCTCTCGCACCAGACCGCTACGGTGGTCGATGAGGATTCCGGCGCAGGTGCCGGCGCCGCCGTGAACGACTGCTTCGCTAACCTGGAGGACGCTGTGGACGAGATCCGCGGCTCGTTGAAGCAGATGCGGCGACTGAGACCGAACGAGGACTCCGGTTCGGTCCGGTTCGGGGTGAGCAACGTGCTGACGTGGATGAGCGCGGCGCTGACGGACGAGGAAACGTGCACGGACGGGTTCGAGGGCGTAGAAGAAGGTCCCGTGAAGAGGAGCGTATGCGATCGAGTAACCAGAGTGAAGAAGTTCACAAGCAATGCTTTGGCGCTGGTGAACGGTTTCGCTAATAAGTTATAA 627 0.6093 MTRHFLLSLLLFASTLSRLVLTVTAGHASGFTSGDASGDTDFIRESCNATLYPDLCFSSLSRYAAAVQRSPGGLARVAVAVALAKAHGAAAYLSHQTATVVDEDSGAGAGAAVNDCFANLEDAVDEIRGSLKQMRRLRPNEDSGSVRFGVSNVLTWMSAALTDEETCTDGFEGVEEGPVKRSVCDRVTRVKKFTSNALALVNGFANKL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9122g00009 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 204 IPR035513 -
Vium9122g00009 208 Coils Coil 117 137 - -
Vium9122g00009 208 CDD PMEI-like_3 46 206 - -
Vium9122g00009 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 200 - -
Vium9122g00009 208 SMART PMEI_2 38 200 IPR006501 GO:0004857
Vium9122g00009 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 204 IPR035513 -
Vium9122g00009 208 NCBIfam pectinesterase inhibitor domain 15 202 IPR006501 GO:0004857
Vium9122g00009 208 Pfam Plant invertase/pectin methylesterase inhibitor 41 200 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9122g00009 Vium-Chr9122 81124 81947 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9122g00009 5 200 Carbohydrate Esterase AT3G49220 28.713 2.25e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9122g00009 - - gmx:100797734 283.108