Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium9122g00009 | ATGACACGTCATTTCCTCCTTTCTCTGTTATTATTTGCGTCCACACTCTCTCGTCTCGTCCTAACTGTCACCGCCGGCCACGCTTCCGGTTTCACTTCCGGTGACGCTTCCGGTGACACCGACTTCATTCGCGAAAGCTGCAACGCAACGTTGTACCCTGACCTATGCTTCTCCTCGCTCTCTCGCTACGCCGCCGCGGTGCAACGTAGCCCCGGCGGCCTCGCGCGGGTGGCCGTGGCCGTGGCGCTTGCTAAGGCGCACGGCGCGGCGGCCTATCTCTCGCACCAGACCGCTACGGTGGTCGATGAGGATTCCGGCGCAGGTGCCGGCGCCGCCGTGAACGACTGCTTCGCTAACCTGGAGGACGCTGTGGACGAGATCCGCGGCTCGTTGAAGCAGATGCGGCGACTGAGACCGAACGAGGACTCCGGTTCGGTCCGGTTCGGGGTGAGCAACGTGCTGACGTGGATGAGCGCGGCGCTGACGGACGAGGAAACGTGCACGGACGGGTTCGAGGGCGTAGAAGAAGGTCCCGTGAAGAGGAGCGTATGCGATCGAGTAACCAGAGTGAAGAAGTTCACAAGCAATGCTTTGGCGCTGGTGAACGGTTTCGCTAATAAGTTATAA | 627 | 0.6093 | MTRHFLLSLLLFASTLSRLVLTVTAGHASGFTSGDASGDTDFIRESCNATLYPDLCFSSLSRYAAAVQRSPGGLARVAVAVALAKAHGAAAYLSHQTATVVDEDSGAGAGAAVNDCFANLEDAVDEIRGSLKQMRRLRPNEDSGSVRFGVSNVLTWMSAALTDEETCTDGFEGVEEGPVKRSVCDRVTRVKKFTSNALALVNGFANKL | 208 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium9122g00009 | 208 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 37 | 204 | IPR035513 | - | |
Vium9122g00009 | 208 | Coils | Coil | 117 | 137 | - | - | |
Vium9122g00009 | 208 | CDD | PMEI-like_3 | 46 | 206 | - | - | |
Vium9122g00009 | 208 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 9 | 200 | - | - | |
Vium9122g00009 | 208 | SMART | PMEI_2 | 38 | 200 | IPR006501 | GO:0004857 | |
Vium9122g00009 | 208 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 41 | 204 | IPR035513 | - | |
Vium9122g00009 | 208 | NCBIfam | pectinesterase inhibitor domain | 15 | 202 | IPR006501 | GO:0004857 | |
Vium9122g00009 | 208 | Pfam | Plant invertase/pectin methylesterase inhibitor | 41 | 200 | IPR006501 | GO:0004857 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium9122g00009 | Vium-Chr9122 | 81124 | 81947 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium9122g00009 | 5 | 200 | Carbohydrate Esterase | AT3G49220 | 28.713 | 2.25e-15 | 72.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium9122g00009 | - | - | gmx:100797734 | 283.108 |