Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9112g00005 ATGGCTTTTGGCTTGCCAATGAAGTCCATGGAGCCAACTATCTGTGGAGACAAGTTAGGTAACCTCATAATGGAAGTAGCTAAAAACTTTGTTGTATATATTGGGATGGTGCTTGCGTGCAATGGTTTACATTTTCTACTAAAGCCTTATAAACAACCACGCATTACTTCAGACATAATTGTAGGACTGTTGGTGGGCAACATAGGGTTTGTACGTAGGCTGTTTGAGAAATTTAACCTGACGTTTGGATTCATCATTGATTTTGGAATGACATGTTACATGTTTACCCTGGGAATAGAGATGGATCCTTATGCACTGTTTGCAAAACCAAATAGGTATACTAAAACTGCTTTAGCAGGAATCATATGCTCGTTCATTCTGGGAGGTCTTGTAACCCCAATGTTCAAATTCTTCCCAGATGAAAACAAGCTGCTGGAGTTCACCCTAGCCTTCTCCACAATGATTTCTAGCACGGACTCACCACTCTTGACCCGTTTAATAACCCAGCTGAAAATAGGAAAATCAGATATTGGCAAGCTCATCATTGGAGCAGGGATGCACACAGATTTTGTGTGCTGTTTGATGCTTTCCATTGGCACCATAGCTGTGCCAATGCCAGAATATTGTCAAAATTTGCTGGGAAGGTTTGAGATTAAGAAGACTGTAAATGTAGTGTTTGCAGTGGTGGTGCAGATAGGGTTCACAGCCATGGTGTCACCAATGCTCTTGAAGTGGGTTAGCAATGAGAACCCTGAGGGTAGACCCATGAAAGGTCCACACTTGGTACTGTCCATCGCCTTCATGGTCTTAATGTGTGCCTCCACCACTATGTATAATTATAATCCAATTTTAAGTGCTTTTCTGGTAGGGCTTTGTGTTCCCAGGGAGGGTAGAGTTTCCAGATGGTTTATCACCAGAATCAACTACATGTTGACCACAATTTTCTTTCCCATCTTTTTCTTGTGGATGGGCTATGAATCTAATTTCAGGCAGTTTGCACTACACCATCCTGCAACATGGGTAAGACTAAGTGTGGTTTTGGTAGTGGCAGTAGCTGGAAAAGTTGTTGGAGTAGTCGTCTATGGGGCCATGTCTGGTGTTCACTGGCCCGAATCGGTTGCAATAGGAATGCTCCTTGTCACTAAGGGCCATTTGCAGATCTACTTAGCTATGAAAGTGATAGGTTGTGGCGGTGTAACTACTACCACAGGCATTGTGTTGGTACTTGGAACCTTTTTAACAGCTTTACCTGCATCAAGAATTGTAGCAAGCATCATTAGAAGAGCAAAGAAAAGAGCACCTACTCATCGTTTGGCACTTCAAATGCTTGACCCCTCAAGTGAGCTAAGGATCCTCCTGTGTGTTCAAGGGCCTCAAAATGCTCCTGCTTCCATCAACTTGGTGGAGATCACAAAAGGGTCTGCTGACACCGGCATTGTGGTGTATGTCACTGACATGATTGAACTCACTGCTGAATTATCAGACTCATTGGAGAGGGATGAAGCATTGCACACAGCAACAGTGAAAGACAGGGCAGTCATGGAGAGGAGAGACCAAGTAACCAACTCATTCCAAGCCTATGTGGCTGACAATGATGATGGCATTACACTCAAAAGAACCATGACACTCTCAACAATCACTAACATGCCACAAGACATTTTCATTTTAGCAGAGGACTTGATGATTGCCCTCATCATATTGCCATTCCACAGGAGCCAACGTGATGATAGAAGGTTGGATAGTGGTAATGCAGGGTTCAGATACGTGAACCGAAAGGTTCTGAGAAGTGCCCCTTGTTCTGTTGGGATTCTAGTAGATAGGGGCCTTGGATCAGTTGAAGGTATAACAAGATGTGAAGCAACAATAAATGTGGCAGTGATATTCATTGGTGGAAAAGATGATAGAGAAGCCCTTGCCTACGCTAGCCGTGTAGCGCAGCATTCACAAGTTAAGCTGACGGTTCTAAGATTCCTGGTAGATGACAACAGTGTGGAGTCTGCAGCATTATACAGGATCATCTCTCCAGAGCAGGAGAAAGAGATGCAATTGGATGATGAATGCTTTACACATTTCTACGAAAGGCATGTGATTGGGGGTCGGATTTCCTACATGGAGAAGCATTTTGCAAATGCTGCTGAGACATTCTCCACTCTGAGATCCTTTGAAGGGCAATACTCATTGGTGATTGTGGGAAGGGAAGGAGGAATGAACTCAGTTTTGACAAGGGGCATGAATGATTGGCAACAGTGCCCAGAATTGGGACCAATAGGGGATGTTCTTTCTGGAACAGACTTCTCAATGACAGTTTCTGTTTTGATCATCCAACAACATAGACTTAGAGGAGAAATAGATGGGTTGGATGAAGATTTCTCTATCATATAA 2382 0.4345 MAFGLPMKSMEPTICGDKLGNLIMEVAKNFVVYIGMVLACNGLHFLLKPYKQPRITSDIIVGLLVGNIGFVRRLFEKFNLTFGFIIDFGMTCYMFTLGIEMDPYALFAKPNRYTKTALAGIICSFILGGLVTPMFKFFPDENKLLEFTLAFSTMISSTDSPLLTRLITQLKIGKSDIGKLIIGAGMHTDFVCCLMLSIGTIAVPMPEYCQNLLGRFEIKKTVNVVFAVVVQIGFTAMVSPMLLKWVSNENPEGRPMKGPHLVLSIAFMVLMCASTTMYNYNPILSAFLVGLCVPREGRVSRWFITRINYMLTTIFFPIFFLWMGYESNFRQFALHHPATWVRLSVVLVVAVAGKVVGVVVYGAMSGVHWPESVAIGMLLVTKGHLQIYLAMKVIGCGGVTTTTGIVLVLGTFLTALPASRIVASIIRRAKKRAPTHRLALQMLDPSSELRILLCVQGPQNAPASINLVEITKGSADTGIVVYVTDMIELTAELSDSLERDEALHTATVKDRAVMERRDQVTNSFQAYVADNDDGITLKRTMTLSTITNMPQDIFILAEDLMIALIILPFHRSQRDDRRLDSGNAGFRYVNRKVLRSAPCSVGILVDRGLGSVEGITRCEATINVAVIFIGGKDDREALAYASRVAQHSQVKLTVLRFLVDDNSVESAALYRIISPEQEKEMQLDDECFTHFYERHVIGGRISYMEKHFANAAETFSTLRSFEGQYSLVIVGREGGMNSVLTRGMNDWQQCPELGPIGDVLSGTDFSMTVSVLIIQQHRLRGEIDGLDEDFSII 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9112g00005 793 Gene3D - 27 434 IPR038770 -
Vium9112g00005 793 Gene3D - 449 746 - -
Vium9112g00005 793 PANTHER CATION/H + ANTIPORTER 30 778 - -
Vium9112g00005 793 FunFam Cation/H(+) antiporter 28 27 435 - -
Vium9112g00005 793 Pfam Sodium/hydrogen exchanger family 32 413 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9112g00005 Vium-Chr9112 47124 50782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9112g00005 14 793 Antiporter Super Family AT3G52080 46.299 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9112g00005 K26731 - gmx:100786469 1250.73