Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9099g00003 ATGCTTTCGACAATGGAAGAAACCACCTATTCAATAGCCTCCTCCTCCTACCCAACAAAAAAAGCAATAATAAAACTACTAACAATCCATCTCTTCCTTTTCTTGAGCCTCCATGTCTCCGACGTCGGAGCACAGAAACAAGCATCGTCATCTTCGCTCGAACTCGAAAGCTGCGATGGAGTTTTTATCTCGTACACCCTTGTGTCGCGGGAGAAGGAGTATCCGCACGTGAAGAACGCATCGAAGCAGGCGTGGGCGTTCAAGGCGGAAGCTACGCTGACGAACGTGGGAGATGAGGAGGTGCAGGGGTGGAAGATGTTTGTGGGGTTCCAGCACCGCGAGATTCTGGTCTCCGCAGACGGCGCCATTCTCATCGACGCCAGCGACTTTCCTGCGGAGGTGGGAAATGGGACGACGATGGTGGGGTCCACCGTGGCGGACTTGAAGACCGCCATTGGCACCGCCGGGGATCTGAACCAGATGAGTGCGAAGATCGATATTGTTGGGACGCAGTTTGGGTTGGGTGTCGGAGCTACCCCCATGCCCAAAACCATTACTCTCCAGAATGATGGATTCAAATGCCCTGCACCTACTCGAAAAGCCTCGACAATGTTCGCATGTTGCAGAAAGGACCCGAAAGTGAAGGCAAAGCCAGTGACGAAAACCAAGTACCCTCCTCGTCGCTCTGGGGATCTCACCATAGAATACGACGTGCTTCAAGCTTTTCAGAACAACTACTATGTCCAAGTGACAATCGAGAACAAACACCCATTGGGTCGTCTTGATCATTGGAACTTGACATGGGAATGGCCAAAGGGAGAGTTCATATATTCCCTTAAAGGAGCTTATGCTCGCAGAAAAGACCCTTCTGACTGCTTGTATGGTTCAGCTGGAAAATTCTACGGTGACATGGATTTCTCGCAAGTTGCAACCTGTCAGAAGAAGCCAATAATCTCTGACCTTCCAGCAGAAAGATCAGAAGATGAAAAAGTTGGGAAACTCCCTTGGTGCTGCAGGAACGGGACCGTTTTGCCTCCACTCATGGACAAGAACAAAGCTAAATCAATGTTCCAGATGCAAGTGTTCAAAATGCCACCAGATACTGATAACAGAACGGCCATCACACCCCCTATGAAGTGGAACATCGATGGTGTCATCAATCCACATTACCAATGCGGTGCACCGGTTAGGGTTGATCCTTCGGTTTTCCCTGACCCCAGTGGACTAAACGCAATCTCCACAGCTGTAGCAACTTGGCAAATAGTTTGCAACATCACCAAACCCAAGCCTCAGCAAAACCGTTGCTGTGTCTCCTTCTCAGCGTTCTACAACGAATCAGCAATCCCTTGCAACACGTGTGCATGTGGCTGTACTGACACAAGGAAGTGCAACTCTCAGGCCTCTCCATTGCTTCTTCCACCAGAGGCTCTTCTTGTGCCGTTTGCAAACAGAACCGTGAAGGCACGAGCATGGGCCAAACTCAAGCACTTGCACGTTCCTAGCAGGCTCCCTTGTGCAGATAACTGCCCCGTGAGCATCAACTGGCACGTGAATTCGGATCACAAGGAGGGATGGACTGCTAGGATAACAATTTTCAACTGGGAGGATTACTCATTTGATGATTGGTTCACTGCGATTCAGTTGACGAAGACTTTCGACGATTTTGAAGATGTTTATTCCTTCAACGGGACAAGAATTCCTGGTCTGAAAACCATTTTCTTAGAAGGCCTGAAGGGTTTGAACTACTTGGCTGGTGAAACCAATGGAACATACGCTAAAGACCCTAGGGTTCCAGGGAAACAACAATCTGTGCTTTCTTTCACCAAAAAGCACGTAAAACACTTTGATATCACAAAAGATGGGTTCCCCTCTAAGGTTTACTTCAATGGAATGGAGTGTTCACTTCCCCCGATCAGACCACACAAAAGTTCGGGGCATAAATCTTCCATCAGTGTCATTGCACTCATATTGACAGCGTTTCTGACTCTCTTGCTGATATAA 2001 0.4858 MLSTMEETTYSIASSSYPTKKAIIKLLTIHLFLFLSLHVSDVGAQKQASSSSLELESCDGVFISYTLVSREKEYPHVKNASKQAWAFKAEATLTNVGDEEVQGWKMFVGFQHREILVSADGAILIDASDFPAEVGNGTTMVGSTVADLKTAIGTAGDLNQMSAKIDIVGTQFGLGVGATPMPKTITLQNDGFKCPAPTRKASTMFACCRKDPKVKAKPVTKTKYPPRRSGDLTIEYDVLQAFQNNYYVQVTIENKHPLGRLDHWNLTWEWPKGEFIYSLKGAYARRKDPSDCLYGSAGKFYGDMDFSQVATCQKKPIISDLPAERSEDEKVGKLPWCCRNGTVLPPLMDKNKAKSMFQMQVFKMPPDTDNRTAITPPMKWNIDGVINPHYQCGAPVRVDPSVFPDPSGLNAISTAVATWQIVCNITKPKPQQNRCCVSFSAFYNESAIPCNTCACGCTDTRKCNSQASPLLLPPEALLVPFANRTVKARAWAKLKHLHVPSRLPCADNCPVSINWHVNSDHKEGWTARITIFNWEDYSFDDWFTAIQLTKTFDDFEDVYSFNGTRIPGLKTIFLEGLKGLNYLAGETNGTYAKDPRVPGKQQSVLSFTKKHVKHFDITKDGFPSKVYFNGMECSLPPIRPHKSSGHKSSISVIALILTAFLTLLLI 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9099g00003 666 Pfam COBRA-like protein 246 426 IPR006918 GO:0010215|GO:0016020
Vium9099g00003 666 PANTHER COBRA-LIKE PROTEIN 7 24 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9099g00003 Vium-Chr9099 15650 18868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9099g00003 54 666 COBRA Gene Family AT3G20580 59.774 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9099g00003 - - gmx:100789175 1088.56