Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9096g00019 ATGGCATCTTTCATTACTCCACTCATCCTTCTCTTCATCTCCGCTATCTTCCTTTTCCTCCACCGCCGATCCCGATACCGCCGACTCCGCCTCCGCCTCCCTCCGGGCACCCTCGGCCTCCCCTTCGCCGGTGAGACCTTGCAGCTCATATCAGCCTACAAGACCGACAACCCCGAACCATTCATCGACCACCGCGTCCACCGCTACGGCCCAATCTTTACCACCCATGTCTTTGGCGAACCCACCGTCTTCTCCGCAGACCCGGAGACCAACCGCTTCATTCTGCTCAACGAAGGGAGACTCTTCGAATGCAGCTACCCCGGTTCCATATCCAACCTCCTCGGAAAACACTCTCTGCTTCTCATGAAGGGCTCTCTTCACAAGAAAATGCACTCCCTCACCATGAGTTTCGCCAACTCTTCCATCATCAAGGATCACTTGCTCGTTGACATAGACCGTCTCATCCGGCTCAACCTCGATTCCTGGTCCGACCGGATTTTTCTCATGGAAGAAGCCAAAAAGATAACGTTTGAGTTGACAGTGAAGCAGTTGATGAGCTTTGATCCAGGTGAATGGACTGAGACTCTAAGGAAAGAGTACGTTCTTGTGATCGAAGGATTTTTCACTCTTCCATTGCCTCTCTTTTCGACCACCTACCGCAGAGCCATCAAGGCCAGGACGAAAGTGGCAGAGGCATTAACGTTGATAGTAAGGGAGAGAAGAAAAGAAAGCGCAAAGGAGGAGAAAAAGAATGACATGTTAGGGGCATTGTTGGCCTCCGGCAACAACTTTTCCGACGAGGAAATAGTGGATTTTATGTTGGCTTTGCTCGTCGCCGGCTATGAAACCACCTCCACCATAATGACTCTTGCCGTCAAGTTCCTCACGGAGACTCCTCTAGCATTGGCACAACTCAAGGAAGAGCATGACCTGATCAGAGCCAAAAAGAGTCACCCAGAGGAACCACTGGAGTGGACAGATTACAAGTCAATGGCGTTTACTCAATGCGTTGTGAATGAAACTTTGAGGGTGGCAAACATTATTGGTGGGATATTCAGAAGAGCAATGACAGACATAAACATAAAAGGTTACACTATTCCAAAGGGATGGAGGGTCTTTGCTTCATTTCGTGCTGTACATCTAAACCCTGATCACTACAAAGATGCGCGCACCTTCAATCCATGGAGATGGCAGAGTAACTCAGAAACAACAAGCCCTGGGAATGTATATACCCCTTTTGGAGGAGGCCCACGTCTTTGCCCTGGTTATGAGCTTGCCAGAGTGGTGCTCTCTGTCTTTCTTCACCGTACTGTTACCCGTTACAGTTGGTTTCCTGCAGAAGAAGACAAGTTGGTGTTTTTCCCAACCACTAGGACGCAGAAGAGGTATCCTATCATAGTGAAGCGCAGAGAGGAGTCCAGACCAAGTAATCAAACATGGAAGGGCAAAGAAGAAGAATCAGAGATTGTAGATTAG 1476 0.4919 MASFITPLILLFISAIFLFLHRRSRYRRLRLRLPPGTLGLPFAGETLQLISAYKTDNPEPFIDHRVHRYGPIFTTHVFGEPTVFSADPETNRFILLNEGRLFECSYPGSISNLLGKHSLLLMKGSLHKKMHSLTMSFANSSIIKDHLLVDIDRLIRLNLDSWSDRIFLMEEAKKITFELTVKQLMSFDPGEWTETLRKEYVLVIEGFFTLPLPLFSTTYRRAIKARTKVAEALTLIVRERRKESAKEEKKNDMLGALLASGNNFSDEEIVDFMLALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDLIRAKKSHPEEPLEWTDYKSMAFTQCVVNETLRVANIIGGIFRRAMTDINIKGYTIPKGWRVFASFRAVHLNPDHYKDARTFNPWRWQSNSETTSPGNVYTPFGGGPRLCPGYELARVVLSVFLHRTVTRYSWFPAEEDKLVFFPTTRTQKRYPIIVKRREESRPSNQTWKGKEEESEIVD 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9096g00019 491 SUPERFAMILY Cytochrome P450 25 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9096g00019 491 Pfam Cytochrome P450 210 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9096g00019 491 PANTHER CYTOCHROME P450 26 29 444 - -
Vium9096g00019 491 MobiDBLite consensus disorder prediction 471 491 - -
Vium9096g00019 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Vium9096g00019 491 FunFam Cytochrome P450 90A1 21 470 - -
Vium9096g00019 491 Gene3D Cytochrome P450 24 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9096g00019 491 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9096g00019 491 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9096g00019 491 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9096g00019 491 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9096g00019 491 CDD CYP90-like 65 469 - -
Vium9096g00019 491 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9096g00019 491 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9096g00019 491 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9096g00019 491 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9096g00019 491 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9096g00019 491 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9096g00019 491 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9096g00019 Vium-Chr9096 211061 215744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9096g00019 122 471 Cytochrome P450 AT5G05690 81.197 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9096g00019 K09588 - gmx:100775886 840.106