Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9096g00018 ATGGCGGGGAAACTGGCAAAGGCAGCTTATGATGCAAAGATGTTGAAGCTTCTGAGAGAGTATAGTCAGGTACTGGTGGTTTCATCTGACAATGTGGGTTCAAACCAGCTTCAGGGGATACGGAGGGGACTCCATGCTGATTCAGTTGTGGTGATGGGAAAGAACACCTTGATGAAACGCTCTATCATCATGGATGCTCAGAAGACTGGCAACAAGGCCTTCCTTAACCTTGTCCCCCTTCTTGTGGGGAATGTGGCATTAATTTTCACCAAAGGTGACATAAGAGAGGTCAGCGAACAGATTGCCAAGTACAAGGTTGTTCAACCGATTCTAATGTGCCCCAAGTATATGTCACATGACACATACCAGAATTGTTCCTATATGCAATCTGGACAGTTACCTTTGGGCCTCACATGTTGTAATCAACAGCAGTCTTCGCAGGTTTCTGAGCCTTTTCTTGTATGCTCAAAATTCCAGCCACACCAACATTGTTTCATGATGAGATCAAGGCAGTTCTTGATGACAAGTATATGGTCTCCTCTTCTCCTTTTGGCTGGCAACTTGTGA 567 0.4515 MAGKLAKAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRRGLHADSVVVMGKNTLMKRSIIMDAQKTGNKAFLNLVPLLVGNVALIFTKGDIREVSEQIAKYKVVQPILMCPKYMSHDTYQNCSYMQSGQLPLGLTCCNQQQSSQVSEPFLVCSKFQPHQHCFMMRSRQFLMTSIWSPLLLLAGNL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9096g00018 188 Gene3D - 4 136 IPR043141 -
Vium9096g00018 188 SUPERFAMILY Ribosomal protein L10-like 7 105 IPR043141 -
Vium9096g00018 188 FunFam 60S acidic ribosomal protein P0 4 135 - -
Vium9096g00018 188 Pfam Ribosomal protein L10 6 104 IPR001790 -
Vium9096g00018 188 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 6 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9096g00018 Vium-Chr9096 206066 209755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9096g00018 7 109 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 67.961 6.55e-45 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9096g00018 K02941 - mnt:21409050 159.073