Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium9096g00006 | ATGCAAAATGAACCGTATTGGTATAATGAAAAAGATGAAGACTATTTCATGACTCCTAATTTTGAAGGGCCAGACTATTTTGCGTGTCAGAGTGAAGATAAGTTTGTCATGACAGCAGAAACGGACAACCAACGGGACAATTCTCTGCATCTTGGTTCCAACTATGAAGAATTTCAACTAAAGGGGAATAGTGATGGTGGTTACATGGACAAGGCATGCCTTGATAATCATTTTTCTGTAGTGGATGGAACTGTGGCTCATTCAAAAGGGTATTGTTATGTTGATAACAAGGACCAGTTTAAAGGGGAATTAGAGGGTAAGGCTGAGAAACCCAGTGTTGCCTGCAGTTGTGAAGTTCCATTCTGCAAAAGCAGTCCTGGTTCTGGAGGTTCTTGCAGTCTGGATCCTACAAACTTCGGCTACCCTAACTTGAAGGAAATCCATCTGAACAATTTTCATTTGGGGGTTGTTGGGGACATTAACTCTTTTGATTCTACTTCAGAGCTAACTCTGGATCAAAGTTTTGACCACTACACTAAAAACGACAGCAGTAAGGAGTACAAGGGTCCTTACGACTTAACTATCGAAGTTACTGATAAAAATCTACCAAATGGACTTGACACCTATAAAGCACAACTTGGTGGAGAATTAACTGAAGACTGTCAAGATCCAGAGCTTGCTGCAGATGGAGAGGATACAACTGATGATGAGCTCTTGAAGTATACTCAAGAGGAAGAATACGAAGTGTTTGATCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAACAAGGAACTTCCGATTGTGCTAAATACAGTCTTGGCTGGAAGGTATTATTTGACCGAGTATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGACCTTCAGACAGGGATAGATGTTTGTTTGAAGATTATTAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTCAATAAGGGTGACCCAGCTGATGAACATCACATTTTGCGCCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTAACTGAACTTCTGCGAGCAAACTTGTATGAATTTCAGAAATTCAACCAAGAATCTGGAGGGGAAGCATATTTTACATTAAAGAGATTGCAGATCATTACTCGTCAGTGTTTGGAAGCATTGCAATACTTGCATGGCTTGGGAATTGTTCACTGTGACCTGAAGCCAGAAAACATTCTAATCAAAAGTTACAAAAGATGTGAGATAAAGGTTATTGATCTTGGAAGTAGTTGCTTCCAAACAGACAATCTGTGCCTATATGTACAGTCCAGATCCTATAGAGCTCCTGAAGTGATGTTAGGTCTTCAATATGATGAGAAGATTGACATATGGTCTCTGGGATGCATCTTGGCGGAGCTATGCTCTGGGGAAGTGCTGTTCCCAAATGATGCAGTTGTGATGATCCTGGCACGCATAATTGGAATGTTTGGTTCTATTGATATGGAAATGTTGGTGAAAGGACAAGAAACGCACAAGTACTTCACCAAAGAATATGATATTTATTACATAAATGAGGAGACTGATCAACTGGAGTTCTTGATTCCAGAAGAGTCATCGTTGGAGCAGCACCTGCAGGTTACTGATACTATGTTTATCAACTTTATCAGATACCTACTCAGCGTCAACCCTAAAAGAAGGCCTACCGCAAGACAAGCACTAAAGCATCCATGGCTTTCCTATGTTTACTAA | 1764 | 0.3991 | MQNEPYWYNEKDEDYFMTPNFEGPDYFACQSEDKFVMTAETDNQRDNSLHLGSNYEEFQLKGNSDGGYMDKACLDNHFSVVDGTVAHSKGYCYVDNKDQFKGELEGKAEKPSVACSCEVPFCKSSPGSGGSCSLDPTNFGYPNLKEIHLNNFHLGVVGDINSFDSTSELTLDQSFDHYTKNDSSKEYKGPYDLTIEVTDKNLPNGLDTYKAQLGGELTEDCQDPELAADGEDTTDDELLKYTQEEEYEVFDLRIIHRKNRTGFEENKELPIVLNTVLAGRYYLTEYLGSAAFSRVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKGDPADEHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLKRLQIITRQCLEALQYLHGLGIVHCDLKPENILIKSYKRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARIIGMFGSIDMEMLVKGQETHKYFTKEYDIYYINEETDQLEFLIPEESSLEQHLQVTDTMFINFIRYLLSVNPKRRPTARQALKHPWLSYVY | 587 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium9096g00006 | 587 | CDD | PKc_DYRK_like | 281 | 583 | - | - | |
Vium9096g00006 | 587 | Pfam | Protein kinase domain | 284 | 583 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium9096g00006 | 587 | PANTHER | DUAL SPECIFICITY PROTEIN KINASE | 114 | 583 | - | - | |
Vium9096g00006 | 587 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 407 | 419 | IPR008271 | GO:0004672|GO:0006468 | |
Vium9096g00006 | 587 | SUPERFAMILY | Protein kinase-like (PK-like) | 270 | 584 | IPR011009 | - | |
Vium9096g00006 | 587 | SMART | serkin_6 | 281 | 583 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium9096g00006 | 587 | Gene3D | Transferase(Phosphotransferase) domain 1 | 335 | 583 | - | - | |
Vium9096g00006 | 587 | Gene3D | Phosphorylase Kinase; domain 1 | 276 | 362 | - | - | |
Vium9096g00006 | 587 | ProSiteProfiles | Protein kinase domain profile. | 281 | 583 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium9096g00006 | 587 | FunFam | Putative serine/threonine-protein kinase dyrk2 | 275 | 362 | - | - | |
Vium9096g00006 | 587 | FunFam | Serine/threonine-protein kinase ppk15 | 360 | 584 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium9096g00006 | Vium-Chr9096 | 98007 | 104489 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium9096g00006 | 278 | 578 | MAP Kinase Gene Family | AT5G19010 | 31.464 | 2.09e-33 | 132 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_DYRK-PRP4 | Vium9096g00006 | Pkinase | 4.4e-51 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium9096g00006 | - | - | vum:124848025 | 1210.28 |