Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9083g00001 ATGTCTGTACCTTCTTTTGCTTCCACTTCTTTTTCACTACAATTCACTTCTCTCTTTGTGTTCTTCATTTTGGGTGGAACTTTTTGCTTAGCCACACATGCCAACACCACACGCCCCCCTCGCCAACTCTCACTAAATTACTATGCCAAATCATGCCCACAGCTAGAACAGCTTGTTGGTTCAGTCACTTCTCAACAGTTCAAACAATCACCTGTCTCTGCCCCTGCCACCATTCGCCTCCTCTTCCATGATTGCTTTGTAGGGGGGTGTGATGCGTCAATTTTAATAGTATCAAAGGGTGGAAGGAAGGAGTTGGCAGAGAAGGATGCAGAGGATAACAGAGACTTGAAGGTGGAAGGTTTTGAGACAGTGAGAAAAGCTAAGGAACTAGTGGAGAAAAAGTGCCCTGGTGTGGTGTCTTGTGCAGATATTCTTGTAATTGCAGCCAGAGATTATGTTCACCTGGCAGGAGGGCCATATTACCCTGTGAAGAAGGGAAGATGGGACGGAAAGATATCAACGGCATCAAGGGTGGCATCAAACATCCCTCGTGCAAACTCGACCGTCGATCAACTCATCAAACTGTTCAATTCGAAGGGCTTAACCACACGGGACCTGGTAGCCCTATCGGGGGCCCACACAATTGGGTTTGCGCATTGCAAGAACTTCGTGGCTCGTCTCTACAGTTTCCGAGGCAAGGGCCAACCGGACCCAGACATGGACCCCAAACTCCTACACGCACTTAGAATGTACTGTCCAAACTTCGGTGGAAACTCCGACATCGTTGCCCCTTTTGATGCCACTACGCCTTTCTTGTTTGACCATGCCTATTATGGCAACTTGCAACAAAAGATGGGCTTGTTGGCCTCTGACCAGGCTCTGGCCATCGACCCACGAACCAAGCCTATTGTCCTAGAATTTGCCAAGGATAACCACAACTTTTTCCAAGCTTTTGTCGCAGCCATGGACAAATTGAGTTTAATCAAAGTCGTACGAGGGGCAAGGCACGGGGAGAAACGTAGAGATTGTAGCATGCACATGTGA 1044 0.4818 MSVPSFASTSFSLQFTSLFVFFILGGTFCLATHANTTRPPRQLSLNYYAKSCPQLEQLVGSVTSQQFKQSPVSAPATIRLLFHDCFVGGCDASILIVSKGGRKELAEKDAEDNRDLKVEGFETVRKAKELVEKKCPGVVSCADILVIAARDYVHLAGGPYYPVKKGRWDGKISTASRVASNIPRANSTVDQLIKLFNSKGLTTRDLVALSGAHTIGFAHCKNFVARLYSFRGKGQPDPDMDPKLLHALRMYCPNFGGNSDIVAPFDATTPFLFDHAYYGNLQQKMGLLASDQALAIDPRTKPIVLEFAKDNHNFFQAFVAAMDKLSLIKVVRGARHGEKRRDCSMHM 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9083g00001 347 CDD secretory_peroxidase 42 344 IPR033905 GO:0004601|GO:0042744
Vium9083g00001 347 Gene3D Peroxidase, domain 2 183 325 - -
Vium9083g00001 347 Gene3D - 46 345 - -
Vium9083g00001 347 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 PRINTS Haem peroxidase superfamily signature 266 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 PRINTS Haem peroxidase superfamily signature 205 220 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 PRINTS Haem peroxidase superfamily signature 157 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 PANTHER - 36 345 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 FunFam Peroxidase 183 325 - -
Vium9083g00001 347 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 PRINTS Plant peroxidase signature 320 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 PRINTS Plant peroxidase signature 204 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 PRINTS Plant peroxidase signature 264 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 PRINTS Plant peroxidase signature 280 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 ProSiteProfiles Plant heme peroxidase family profile. 42 347 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 FunFam Peroxidase 46 193 - -
Vium9083g00001 347 Pfam Peroxidase 62 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 205 215 IPR019793 -
Vium9083g00001 347 SUPERFAMILY Heme-dependent peroxidases 42 345 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium9083g00001 347 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9083g00001 Vium-Chr9083 22480 26061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9083g00001 11 347 Peroxidase AT2G34060 61.224 1.08e-155 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9083g00001 K00430 - gmx:100777463 602.823