Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium907g00001 ATGCCTCATTCTTCTTCTTCTTCTTCTCCCGTTTCAACCATTTCCAATCTCCGTATTCGCGCCCTAATACTTTGGTCCTCCAAGAACTACGCAATAGCTGCATTCGTTTTCCTCCTACTCTTCTCCCTCACTCTCTTCTCTCACTTGGATTCCCGTTCCCGTTCGCATTCCCGTTACCCCTCCCATCCACGCTCCACCCTCGTTCCCTTAACGCTCCTCCATAACGCCAACCGAACGCGCGCGCTTTGCTTGGACGGGAGCGCCCCCGGTTACCACTTCCAAAGCGGGTTCGGATCCGGATCTCTCAATTGGTTGCTCCACATTGAGGGAGGAGGGTGGTGCAATTCAATAGCTTCATGTACTCAACGAAAATTCACCCATTTGGGGTCTTCCAATTATATGGAAAAAAGTATTCCTTTTTCAGGAATACTGAGCTCTGACCCCTCTCAAAACCCAGGTTAG 462 0.5022 MPHSSSSSSPVSTISNLRIRALILWSSKNYAIAAFVFLLLFSLTLFSHLDSRSRSHSRYPSHPRSTLVPLTLLHNANRTRALCLDGSAPGYHFQSGFGSGSLNWLLHIEGGGWCNSIASCTQRKFTHLGSSNYMEKSIPFSGILSSDPSQNPG 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium907g00001 153 Pfam Pectinacetylesterase 65 152 IPR004963 GO:0016787
Vium907g00001 153 PANTHER NOTUM-RELATED 38 152 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium907g00001 Vium-Chr907 3133 4634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium907g00001 17 152 Carbohydrate Esterase AT3G09410 48.201 1.80e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium907g00001 K19882 - vum:124824008 271.552