Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9043g00005 ATGGGGTTGATCGTGGAGGTCGAGAACGTCGACGACGCCGTTTTGGTTCCGCCCCCTAACTTCGCCATGGTCGAGGACTGCATTTTCCGATCCAGCTTTCCTACCTCCTCCAATTTCCTCTTTTTCCAAACCCTAAACCTTCGTTTCATCGTATACCTGTGCCCCGAGCCTTATCCTGAGGAAAATCTAGAGTAGTTCCTTCAGTCACAGAATATTCGTCTCTTTCAATTTGCAATTGAAGGGAAAACGGTAATTTTTCTTTTCTCCTGTATTGCTACTATAATTATTATTCTTCTTGTTCATATATCACGAGTGAAAGGTTTCGAGTACAATGCTTCGAGTAAAACTATTTTTCCTCCAATTGAAAAATTTACTTTGACAAATTATGAACCCTAA 396 0.4091 MGLIVEVENVDDAVLVPPPNFAMVEDCIFRSSFPTSSNFLFFQTLNLRFIVYLCPEPYPEENLEXFLQSQNIRLFQFAIEGKTVIFLFSCIATIIIILLVHISRVKGFEYNASSKTIFPPIEKFTLTNYEP 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9043g00005 131 PRINTS Plant and fungal dual specificity phosphatase signature 52 65 IPR020428 GO:0016791
Vium9043g00005 131 PRINTS Plant and fungal dual specificity phosphatase signature 15 32 IPR020428 GO:0016791
Vium9043g00005 131 Gene3D Protein tyrosine phosphatase superfamily 14 116 IPR029021 -
Vium9043g00005 131 PANTHER TYROSINE-PROTEIN PHOSPHATASE 11 82 - -
Vium9043g00005 131 Pfam Tyrosine phosphatase family 15 83 IPR004861 -
Vium9043g00005 131 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 94 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9043g00005 1 94 Protein tyrosine phosphatase (PTP) family AT5G16480 60.638 1.21e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9043g00005 K18045 - gmx:100787713 135.576