Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9011g00001 ATGGATAAGAGTATTTGTTTGGCTTCCCGTTATAATCCCAATAACAAGGATGAGGAAGCGAAGAATTTCAGCTGCGCTACCATGAATCTCTGCTCCAAATGCTACGGTGCGATCCGTTTGAAGGAGCAGGACGACGTGTCGACCAAATCCACGATCGAAACCGCGCTTTCTTCCTCCGCGAAGACACCGCTGTCCACGGCGCCACCGGCGGCGATTGATGTCCTTCTCGAAGCATCGCCCCCGCCTTCGCTCCCGGCAGAAGCTGCGGTCGCGATTCCGGTTCAGGTCGCGGTGGTGACGAGCTCTACATCCTCGGGTTCAGCGCAACCGAACCGGTGCGCCGCGTGTCGGAAGCGTGTGGGGTTGACTGGGTTCAAGTGCAA 383 0.5744 MDKSICLASRYNPNNKDEEAKNFSCATMNLCSKCYGAIRLKEQDDVSTKSTIETALSSSAKTPLSTAPPAAIDVLLEASPPPSLPAEAAVAIPVQVAVVTSSTSSGSAQPNRCAACRKRVGLTGFKC 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9011g00001 127 SUPERFAMILY AN1-like Zinc finger 104 127 IPR035896 -
Vium9011g00001 127 Gene3D - 95 127 IPR035896 -
Vium9011g00001 127 PANTHER AN1-TYPE ZINC FINGER PROTEIN 24 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9011g00001 Vium-Chr9011 3364 4395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9011g00001 26 127 C2H2 Transcription Factor Family AT3G52800 42.857 5.99e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9011g00001 - - vum:124847883 222.631