Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8978g00001 ATGGTGCAGCAAAAGAACCTAGTTGATGAAGTGTCCGGTTGGCTCAGAATCTATGATGACGGTTCGGTCGACCGGACATGGACCGGACCGGCCCAGTTCAAGTTTATGTCTGATCCGGTTCCTTCTCATGAAAAATTTATAGATGGTATTGCAGTTCGTGATACCATCATTTCTCGTGAAGGCCATGACCTCCGTGTTCGATTATACTTGCCGGAGAAAGCGTCGGAAAGTAAAAAAAAGTTACCCATCATTCTTCATTTTCAGGGTGGTGGGTTTTGCATCAGTGAACCGGACTGGTTCATGTACTACCAAATTTACGTTCGAGTTGCCCTTTCAACTCAGGCAATTGTAGTTTCTCCTTTCCTCCGACGTGCACCGGAGCACCGTCTCCCAACCGCCATTGATGACGCCTTTGACACCCTCCTCTGGCTCCAATCTGTGGCCCGGTCCGGTTCGCGTGAACCGTGGCTCGAGGAACATGGGGACTTCAACCGGCTTTTTCTCATAGGGGACAGTTCTGGCGGGAACGTGGTGCATGAGGTGGCTTCAAGGGCCGGTTCGGTGGACCTAAGCCCGGTTCGGGTTGCAGGAGCGATCCCGGTTCACCCCGGGTTTGTCCGGTCAGAGCGGAGCCGGTCCGAGCTGGAAATGCCACAATCACCGTTTTTAACGTTGGACATGCTCGACAAGTTCCTAGAGTTAGCACTGCCGGTCGGGGCGACGAAGGACCACCCAATAACGTGCCCGATGGGTGAGGCGGCACCGGCGCTTGAAGGGCTGAAACTGCCGGCGGTGCTGCTGTGCGTGGCGGAGATGGACTTGGTGAGGGACACGGAGATGGAGTACTATGAGGCCATGAAGAAAGCCAACAAGGACGTTGAACTTTATGTGAGCCATGGAATGAGTCATAGTTTTTATTTGAACAAGGTTGCTGTGGATACGGACCCCAATGTTAGTGCAAAAACCGATGCTTTCATAACTAAGATCAAGGAGTTCATTCAGGAGCACTGA 1011 0.5242 MVQQKNLVDEVSGWLRIYDDGSVDRTWTGPAQFKFMSDPVPSHEKFIDGIAVRDTIISREGHDLRVRLYLPEKASESKKKLPIILHFQGGGFCISEPDWFMYYQIYVRVALSTQAIVVSPFLRRAPEHRLPTAIDDAFDTLLWLQSVARSGSREPWLEEHGDFNRLFLIGDSSGGNVVHEVASRAGSVDLSPVRVAGAIPVHPGFVRSERSRSELEMPQSPFLTLDMLDKFLELALPVGATKDHPITCPMGEAAPALEGLKLPAVLLCVAEMDLVRDTEMEYYEAMKKANKDVELYVSHGMSHSFYLNKVAVDTDPNVSAKTDAFITKIKEFIQEH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8978g00001 336 Gene3D alpha/beta hydrolase 15 336 IPR029058 -
Vium8978g00001 336 Pfam alpha/beta hydrolase fold 84 306 IPR013094 GO:0016787
Vium8978g00001 336 PANTHER ARYLACETAMIDE DEACETYLASE 9 307 - -
Vium8978g00001 336 SUPERFAMILY alpha/beta-Hydrolases 7 336 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8978g00001 Vium-Chr8978 12478 13914 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8978g00001 7 326 Carbohydrate Esterase AT1G68620 33.028 1.53e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8978g00001 - - gmx:100806530 571.237