Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8966g00008 ATGGAGGAGGTCAAGTTGGTTTTGTTAGGCGCAAGGTTCAGTATGTTTGGGATGAGAGCTAAGATAGCTTTGGCTGAGAAAGGAATAAAATATGAGTACATGGAAGAAGATCTCACCAACAAGAGCCCCTTGCTTCAAGAAATGAATCCAATTTACAAGAAAATTCCAGTTCTCATACATCATGGAAGACCAATCTGTGAGTCCCTCATCATTGTTGAGTATATTGACATGGTTTGGCACAACAATTCTCCTTTGCTCCCCTTGGATCCCTACCACAAAGCACAAGCCAAGTTCTGGGCTGATTTTGTAGATCAGAAGGTGTATCATGCTTCTAAGAGAGTGTGGATTTCTAAGGGAGATGAGCAAGAGGTGGCAAAGAAGAACTTTCTAGAGAGCTTGAAGCATTTGGAGGAGTTTCTTGGAGACAAACCTTATTTTGGTGGAGAAACATTTGGGTTTGTTGATGTTGCCCTCATTCCTTTCTATTGCTGGTTTTATACCTATGAGACCTTTGGCAATTTCAAAGTGGAGGCAGTGTGTCCAAAACTGATCTCCTGGGCTAAGAGATGCATGCAAAAACAAAGTGTATTTGAAACTCTTGCAGATGAAAAGGAGGTCTATGAGGCTGTTTTGGATTATAAGACAAAATTTATATTGAATTAA 663 0.4027 MEEVKLVLLGARFSMFGMRAKIALAEKGIKYEYMEEDLTNKSPLLQEMNPIYKKIPVLIHHGRPICESLIIVEYIDMVWHNNSPLLPLDPYHKAQAKFWADFVDQKVYHASKRVWISKGDEQEVAKKNFLESLKHLEEFLGDKPYFGGETFGFVDVALIPFYCWFYTYETFGNFKVEAVCPKLISWAKRCMQKQSVFETLADEKEVYEAVLDYKTKFILN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8966g00008 220 Gene3D Glutaredoxin 1 88 - -
Vium8966g00008 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 217 IPR010987 -
Vium8966g00008 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Vium8966g00008 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vium8966g00008 220 SFLD Main.3: Omega- and Tau-like 3 217 IPR045073 -
Vium8966g00008 220 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Vium8966g00008 220 FunFam Glutathione S-transferase U20 89 220 - -
Vium8966g00008 220 SFLD Glutathione Transferase (cytosolic) 3 217 IPR040079 -
Vium8966g00008 220 Pfam Glutathione S-transferase, C-terminal domain 125 189 - -
Vium8966g00008 220 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Vium8966g00008 220 Gene3D - 89 220 - -
Vium8966g00008 220 CDD GST_N_Tau 6 79 - -
Vium8966g00008 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 207 IPR045073 -
Vium8966g00008 220 FunFam Tau class glutathione S-transferase 1 88 - -
Vium8966g00008 220 SUPERFAMILY GST C-terminal domain-like 80 215 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8966g00008 Vium-Chr8966 61799 62582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8966g00008 5 218 Glutathione S-transferase Gene Family AT1G78380 57.944 1.77e-94 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8966g00008 K00799 - gmx:548030 410.609