Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8927g00001 ATGGGAAAGAAAGCTCTCAGACTTCCCTCTCTTTTCAAAACCAAAGAACCACCAAGAAACCATCACCACCACCACCACCACCACCTTCTTCACAATCATCATCCATGGCAATTCATACCCTCTTGCGGCCACTCCAAGACCCTCTCTTTCCGAGGTGCTGCCGACGATGACATCTTCAAGACAGTTAACTCCGTCTTCTTTGACCCTTCCGAGAGTGTCATCGAAACTCCCAAGTCATGGTTCACCACCTCGTCCGAATCCGCCAGCATCTCGACCGAGTCAGAAGACTATTACTGCTGCGACGGGGAGTCTCTGGAGATGTTGGTGCGTGGTGTGAGATCAGAGAGGCTTTTCTTCGAGCCTGGTGACACAAGCTCCATCTTGGAAAAGGCCAAGGCCAGTGGGTTTCCCTTCAAAGAAAGTGTGGTTCTTGCCATGGAATCAGAGGACCCTTACGAGGATTTCAAGAGATCAATGGAGGAGATGGTGGAATCTCATGGAGTAAGAGACTGGGAGGGCTTGGAGGAGCTTTTGACTTGGTATCTCAAGGTCAATGGCAGGAACAATCACGGATTCATAGTCGGTGCTTTTGTTGATTTGCTCTTTAGTTTAGCAGCTTCTAACGATTCTAACTCTTGTTCCGATTCAACTGCATATTCTTCTGCTATTTCTTCTTTTGCTTCTTCCCCCTTGTGTCATGAGATTGTCGAGCATGGCATTGGGAATGATGATGCTGTAACATCTTAG 747 0.4793 MGKKALRLPSLFKTKEPPRNHHHHHHHHLLHNHHPWQFIPSCGHSKTLSFRGAADDDIFKTVNSVFFDPSESVIETPKSWFTTSSESASISTESEDYYCCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVRDWEGLEELLTWYLKVNGRNNHGFIVGAFVDLLFSLAASNDSNSCSDSTAYSSAISSFASSPLCHEIVEHGIGNDDAVTS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8927g00001 248 NCBIfam uncharacterized plant-specific domain TIGR01568 142 205 IPR006458 -
Vium8927g00001 248 ProSiteProfiles OVATE domain profile. 144 203 IPR006458 -
Vium8927g00001 248 Pfam Transcriptional repressor, ovate 148 204 IPR006458 -
Vium8927g00001 248 MobiDBLite consensus disorder prediction 1 27 - -
Vium8927g00001 248 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 29 205 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8927g00001 Vium-Chr8927 6944 8095 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vium8927g00001 Ovate 5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8927g00001 - - vun:114190765 427.557