Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8923g00002 ATGAACAACCCCAACACCGACAGCTTCTCTCTGTTGGGTGTTCTTCATTCCCCCCACTTCTCTGAACTTCTCAGGGATTTCGCCACGCGAGAACTCAACGCGTTTTTATGGCTATCTCTTGTTGTTGTCACCACCCTTTTGCTCAGAAGACTCTTTAGCCTATTTGGGATATGGCGCAGGGCTAGAACCATTCCTGGGCCTCCCTCTTCCTCGTTTTTTGGAGGCTGCAAGCTCTTTTCCCGTCCAAATTTCACCTTCACTGACGTGTTGTCAGAATGCCATAAAAAGTATGGACCTATTGTTAAACTGTGGTTAGGTCCTACTCAGCTTTTGGTGTCAGTAAGGGATCCAATCTTAATCCAAGACATGCTTATAAAAGCCGAGGATAAGTTGCCTTACACGGGAAAACTGTTTCATCTGGCCTTTGGACAATCAAGCCTCTTTGCCCCTTCATTTGAAAAGGTGCAAAAGAGAAGGGAATTATTGGCAACAGAGTTAAACGAAAGATTGCTGAAGAATGGTGATATGATTCCTGTGAAAGTTGCAGACTTTATCACAGATAAAATAGAAAACATAAAAAAGAAAGGAGGTATTGATTCCAGTTTGGTTTCTCAACATATCGCTTTCACTATAATGGGTGTCACATTCTTTGGAGATGGCTTCTTGGCCTCGCCGAAGGCTGCAATGTATGAGGAACTGTTCATGACCATAGCTAAAGATGCTTGCTTTTGGGCCTCCTATAATGTTACTCCTTTCTGGAGACGTGGATTTTGGAACTACCAATGCTTATGTACAAAGTTGAAATGCTTAACTCAAGACATCCTTCAACATTGCAGAAAAGGATGTAAACTATCTAGCCATACTAAGCATGATGTACATAATGAAAGTTCCAATAAAGAAATGAAGTCAGCAGATGGTGCACAATGCTGTTCTGATGATGAGTTCCAAGATTACTATTTCTTTCGAGATCTTAAGGATCATCAAGATGGTAAAGAAGAATCTTGTGGGAATGTAATGCGCATGATATTTCACGGATGTCAAACTACCTCTGTTCTAATCACGGATGTATTGACTAGGCTTGTCATGCATGGGGAAATACAGGATAAGGTTTATTCAGAGATTAGAATGGTAGGAAGAAACCCATCGAAATATGAGCATGAAGATGTTTATAGGATGCCGTTGTTATTGGCTACAATTTATGAATCTGCACGTCTTCTTCCCACTGGTTCAATGCTGCAGAGATGTTCTTTGAAACATGACTTGAGCTTTGCATCTGGTGTAACCATTCCTGCTGGAGCTGTATTGGTTGTACCAGTTGAATTGGTACAGAAGGATGAATTCAATTGGGGGAGTGATGCAAGTCATTTCAATCCTTACAGATTTCTCTCAACTGTTACAAATAGATCAGGTGGTAAGAGAGAAAAAATTGTTGCTCATCTATTGCTAATCTTTGATATTAAACTCTCAGGTTCTGCTGAAGACCTTTCTAGTAGAGGATTCAGTTCATTTGTACTAAATGATCCAAACGAAAATGCAGCATTCTTGCCTTTTGGATCAGGTGCACGGGCTTGCATCGGACAGAAATTTATCATCCAACTTGTTGCCTCAGTGTTGGCATCATTGCTAAATAAATATGAGATACGGCTTAGCACAGACTCAAATGATGACTCAAACACAACCTTGAAGAATAATCTTCTGCAGCGTCATCCCAGTTCACGGATATTATTCGTGAGAAGGGACCAGTGA 1746 0.4089 MNNPNTDSFSLLGVLHSPHFSELLRDFATRELNAFLWLSLVVVTTLLLRRLFSLFGIWRRARTIPGPPSSSFFGGCKLFSRPNFTFTDVLSECHKKYGPIVKLWLGPTQLLVSVRDPILIQDMLIKAEDKLPYTGKLFHLAFGQSSLFAPSFEKVQKRRELLATELNERLLKNGDMIPVKVADFITDKIENIKKKGGIDSSLVSQHIAFTIMGVTFFGDGFLASPKAAMYEELFMTIAKDACFWASYNVTPFWRRGFWNYQCLCTKLKCLTQDILQHCRKGCKLSSHTKHDVHNESSNKEMKSADGAQCCSDDEFQDYYFFRDLKDHQDGKEESCGNVMRMIFHGCQTTSVLITDVLTRLVMHGEIQDKVYSEIRMVGRNPSKYEHEDVYRMPLLLATIYESARLLPTGSMLQRCSLKHDLSFASGVTIPAGAVLVVPVELVQKDEFNWGSDASHFNPYRFLSTVTNRSGGKREKIVAHLLLIFDIKLSGSAEDLSSRGFSSFVLNDPNENAAFLPFGSGARACIGQKFIIQLVASVLASLLNKYEIRLSTDSNDDSNTTLKNNLLQRHPSSRILFVRRDQ 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8923g00002 581 Pfam Cytochrome P450 65 567 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8923g00002 581 Gene3D Cytochrome P450 58 572 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8923g00002 581 CDD cytochrome_P450 98 573 - -
Vium8923g00002 581 SUPERFAMILY Cytochrome P450 64 579 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8923g00002 581 PANTHER CYTOCHROME P450 34 548 - -
Vium8923g00002 581 PRINTS E-class P450 group I signature 514 524 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8923g00002 581 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8923g00002 581 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8923g00002 581 PRINTS E-class P450 group I signature 524 547 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8923g00002 581 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 517 526 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8923g00002 Vium-Chr8923 21864 27831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8923g00002 32 546 Cytochrome P450 AT1G13710 22.873 1.43e-19 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8923g00002 - - vum:124847778 1162.52