Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8910g00009 TATCCAATTTTCCTGTTTTGTTTCTCAACGTGGCTTCTTGCTTGTTTCTTTTCTCTTCAGCTCTCCTGCACTTTCGATCCAGTTCTTCCTTACCTTGCTATCAACTACTTAGATCGCTTCCTCGCTAACCAAGGAATATTGCAACCAAAGCCATGGGCAAACAAGCTTCTTGCAATAGCTTGCTTTTCTTTAGCGGCCAAGATGTTGAAAGCAGAGTACTCGGCCACTGATGTCCAGGTTCTTCTGAATCATGGTGATGGAGGTGTCATTTTTGAGACACAAACAGTTCAAAGAATGGAGGGAATTGTCTTGGGGGCTCTCCAGTGGCGAATGCGTTCGATCACCCCCTTCTCTTTCATTCCCTTCTTCGTGAATTTGTTCAGGCTCAAAGACCCGGCATTTAGACAGGTTCTGAAGGATCGAGCATCTGAAATCATACTGAAGTCACAAAGAGAGATAAAGGTCTTGGAATTCAAGCCATCTGTAGTTGCTGCGTCAGCCCTTCTGTATGCTTCACATGAGTTGTTTCCCTTTCAATATCCATGCTTCTTAGGAGCAATATCCGACTGTTCATATGTTAACAAAGAAACTGTGGTGCAATGTTATAATGTGATACAGGACATAGCCAATGAGGAGTACGAATCTGTGTTGAATATAAATTCAACTTCAGACACCCCGGTTAATGTGTTAGACGAACATTTTCTAAGCTTGGAAAGTGAAAAAACCAACGGCGTGATACAAGAGCAGGAGTTCAAAAGAAGGAAAATTGCCGATTATGGCAACAAACCCACTGTCCCGTTTTCTCATTTTCATCAATGCTGA 822 0.4258 YPIFLFCFSTWLLACFFSLQLSCTFDPVLPYLAINYLDRFLANQGILQPKPWANKLLAIACFSLAAKMLKAEYSATDVQVLLNHGDGGVIFETQTVQRMEGIVLGALQWRMRSITPFSFIPFFVNLFRLKDPAFRQVLKDRASEIILKSQREIKVLEFKPSVVAASALLYASHELFPFQYPCFLGAISDCSYVNKETVVQCYNVIQDIANEEYESVLNINSTSDTPVNVLDEHFLSLESEKTNGVIQEQEFKRRKIADYGNKPTVPFSHFHQC 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8910g00009 273 Gene3D - 113 203 - -
Vium8910g00009 273 FunFam D6-type cyclin 8 109 - -
Vium8910g00009 273 Pfam Cyclin, C-terminal domain 114 212 IPR004367 -
Vium8910g00009 273 SUPERFAMILY Cyclin-like 16 111 IPR036915 -
Vium8910g00009 273 Gene3D - 25 112 - -
Vium8910g00009 273 FunFam D6-type cyclin 110 203 - -
Vium8910g00009 273 SUPERFAMILY Cyclin-like 95 210 IPR036915 -
Vium8910g00009 273 SMART Cyclin_C_2 114 229 IPR004367 -
Vium8910g00009 273 SMART cyclin_7 10 105 IPR013763 -
Vium8910g00009 273 SMART cyclin_7 118 207 IPR013763 -
Vium8910g00009 273 CDD CYCLIN_AtCycD-like_rpt2 114 205 - -
Vium8910g00009 273 PANTHER CYCLINS 11 214 IPR039361 -
Vium8910g00009 273 Pfam Cyclin, N-terminal domain 18 111 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8910g00009 Vium-Chr8910 120531 122415 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8910g00009 26 257 Core Cell Cycle Gene Families AT4G03270 46.414 2.30e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8910g00009 K18812 - gmx:100799951 471.085