Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8831g00001 ATGGATGCACAAGCCAAGAAAAAGGCTTTGTTTCGTGCTAAATTGAATGCCCAGAAGAAGGAGAAGCGTATAGAATCTCCCCTTGTGAGGTATAATGAATTTGATCAACCTGTTTGCCGGGTTTGTGATGTTGTTCTGAAGTCCGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGGCAATAAGTAATCTGAAAGCTAATGCAGCTGGGTTAACTCAACAAAACAATGCAAAGCCTGTTTCAGATGCCAACATTCCCAAGGCTAAACCAGAACATCCTTTGGGATCACAATCGAAACTTCCAGAAAGTTCACGAGAAGTGTCTAAACCTCAATCTTCGTCAGTGCTTCCACCAGGTTTTTTTGATGACAATGATTCGGGAAAGAAAAGTTCTGACCATTTAGCAGACTCTGATTTAGGTAGAAAACCTGCGGTTTCTGCTCAAAATCAGGCGTTAAACTTCAAGAAGGAGAAAGGTCATTTTCATGACAATAGTGCTGCAGAGTCAAATGTTAGCGAGGCCTCAACGGAGAGTAAGCAGACCTCAGTTAATAGTACTGATACAGAGATCAAGCAAGTAAAAGGGAGTCTGCCTGAAGGATTTTTTGACAATAAGGAAGCTGATTTGCGTGCCCGTGGCATAAAGCTTGTAAAGCCAGATGTCAAAGACGAGTACAAGGAATTTGAGAAGTTGATTCAAGAAGATTTGCAGGAGGTTGACAACAGGTTGGAGGAAGAAGAGATTGATGCAGCCGAAATGATAGAGGAAGCTGAATCTGTAGAGCAGAAGATCTTCAGGGAGAAAGTGGAAATGTTGAAGAAGAGGAGATTGGATCTAAAAGCTGCTAATGCTGCAAAGCGTAATAAATCATCTGAGGTTGTAGCCAAGGAATCTACACACGAAGAGTCATCCAGTGATGATGAAAGTGAAGAAAATTTTGCCGTGGATTGGAGAGCACAACACTTGTGA 981 0.421 MDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVVLKSESLWDAHQVSRKHREAISNLKANAAGLTQQNNAKPVSDANIPKAKPEHPLGSQSKLPESSREVSKPQSSSVLPPGFFDDNDSGKKSSDHLADSDLGRKPAVSAQNQALNFKKEKGHFHDNSAAESNVSEASTESKQTSVNSTDTEIKQVKGSLPEGFFDNKEADLRARGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMIEEAESVEQKIFREKVEMLKKRRLDLKAANAAKRNKSSEVVAKESTHEESSSDDESEENFAVDWRAQHL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8831g00001 326 MobiDBLite consensus disorder prediction 286 307 - -
Vium8831g00001 326 Coils Coil 233 267 - -
Vium8831g00001 326 MobiDBLite consensus disorder prediction 162 193 - -
Vium8831g00001 326 PANTHER UNCHARACTERIZED 1 326 IPR040050 GO:0003676|GO:0005681|GO:0008270
Vium8831g00001 326 MobiDBLite consensus disorder prediction 129 143 - -
Vium8831g00001 326 Pfam Zinc-finger of C2H2 type 39 61 - -
Vium8831g00001 326 Gene3D Classic Zinc Finger 32 70 - -
Vium8831g00001 326 MobiDBLite consensus disorder prediction 72 146 - -
Vium8831g00001 326 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
Vium8831g00001 326 MobiDBLite consensus disorder prediction 169 193 - -
Vium8831g00001 326 MobiDBLite consensus disorder prediction 286 326 - -
Vium8831g00001 326 MobiDBLite consensus disorder prediction 101 123 - -
Vium8831g00001 326 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8831g00001 Vium-Chr8831 1622 6706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8831g00001 1 326 C2H2 Transcription Factor Family AT3G02860 53.754 2.93e-98 291