Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium8795g00045 | ATGTGGCAAAATCAGGCCAATCATTCTTCTTACAGTGATTCTGTCAAGGCTCTTGAAGATGATATACAACATGCTAATTCCTTGGCATTGTCACTTCCTGGAGATTGTGATGGGAACTTTTTTCAGATGAAATTATCTTACAGCCCCTTTGCACCTCTTTTCTTGCACTTGATTCAATGGTTGGATCTTAGTTGCACAGATACTTTACCTGTGTATTTGGGATTACTCCATATACTAATTTTCAATGTATACGCTGATGGAATACCATCTATTTCCTCAAGTGAAAGGAAAGCAACTATAAAGGAATTTTATGCTGTTATATACCCTTCATTAAGGTTGCTTCAAGGCGAGTTTAACAATGATCCAAGACACAGTTATGCAGAAGTGAAGAGAAAGAGGCTTGAAAAGGTTCTCAGTAAAGATTTAGAGGGAGATGAAGAATGTGGCATATGCATGGAAAACAACATGAAGATGGTTCTGCCTAATTGTGGACATTCCTTCTGCATAAGTTGCTTCCATGATTGGTACATGAGATCAGAGTCATGTCCCTTTTGCCGTGGAAGCATGAGAAGGATCAGTCCTGCAGATTTATGGATGGTCATTGGCAACAGTGATGTGGTTGACAGCTTCACCATTGCAAAAGACAATTTGAGACGTTTGTACCTTTTCATTAAAACTCTGCCTCCAATCTTAGCAGAACCACATCTACTATACACATTCAATTACATGCTATGA | 735 | 0.3878 | MWQNQANHSSYSDSVKALEDDIQHANSLALSLPGDCDGNFFQMKLSYSPFAPLFLHLIQWLDLSCTDTLPVYLGLLHILIFNVYADGIPSISSSERKATIKEFYAVIYPSLRLLQGEFNNDPRHSYAEVKRKRLEKVLSKDLEGDEECGICMENNMKMVLPNCGHSFCISCFHDWYMRSESCPFCRGSMRRISPADLWMVIGNSDVVDSFTIAKDNLRRLYLFIKTLPPILAEPHLLYTFNYML | 244 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium8795g00045 | 244 | PANTHER | RING FINGER PROTEIN 41, 151 | 9 | 228 | - | - | |
Vium8795g00045 | 244 | SMART | ring_2 | 148 | 185 | IPR001841 | - | |
Vium8795g00045 | 244 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 118 | 195 | IPR013083 | - | |
Vium8795g00045 | 244 | SUPERFAMILY | RING/U-box | 134 | 190 | - | - | |
Vium8795g00045 | 244 | Pfam | Zinc finger, C3HC4 type (RING finger) | 145 | 191 | - | - | |
Vium8795g00045 | 244 | ProSiteProfiles | Zinc finger RING-type profile. | 148 | 186 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium8795g00045 | Vium-Chr8795 | 227254 | 229626 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium8795g00045 | 112 | 204 | C3H Transcription Factor Family | AT2G20030 | 31.068 | 1.07e-07 | 50.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium8795g00045 | - | - | gmx:100805014 | 419.083 |