Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8795g00027 ATGGCAGCTCTGTTACCTTGCGCGCCCAACATAGTCTCTGCTCCGTTCGGGAACCGGAGCACAAGCCGCCTTCCCAACCGTCCTCAATCCCACGCTTTCTCCGGTTCGACCAGGCACTTTCTTCGCGGCTCTCTATCCGTCGCCCGGTTCGGATTCAAACCCGAATTCTTGCCCGAGCCGGAGCACGCTGAAGGCGTGCTCAGAGAACTGTTTGGTCGAGCGGAGGGACTTCTTTACACGATTGCAGACGCCGCCGTATCTTCTTCTTCCGACACGGTTGCTGCTTCCGCCACCGCCAAACAGAGCAACGATTGGCTTTCCGGAATCACCAATTACATGGAGACGGTTCTTAAGGTACTCAAGGATGGGCTTTCTGCTTTGCATGTCCCATATGCTTATGGTTTTGCAATTATACTGCTCACAGTTCTTGTAAAAGCTGCTACTTTTCCCCTAACCAAAAAGCAGGTAGAATCCTCCTTAGCTATGCGAACTTTGCAACCTCAAATAAAGGCTATCCAGGAGCGGTATGCTGGTGATCAGGAGAGACTTCAACTTGAAACTGCTAGATTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCCACACTCGCAACCATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCAAATGTGGCTGACGAGGGACTCCTTACTGAAGGCTTCTTTTGGATACCTTCTCTTGCTGGTCCAACTACAATCGCAGCTCGTCAAAATGGCAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTGCCCCTCCCCTTGGATGGTCAGATACATTGGCTTATCTGGTCTTGCCGGTGTTGCTAATCGTCTCTCAGTACATATCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAAAGTTCTCAAGTATTGACCAAGTTCCTTCCATTAATGATTGGTTACTTTGCTCTCTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGGACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCCAAAAATCCTGTGAGGCAAGTCCCAGATGATATCATCAAAAATGACGGAACCCGGGTTCAGAAGTCAATATCTAAGCTAAATTCCACAATAGTGGAAGAAGCCGGCCAAAGTGAGAAAACATCAGAGGGGCCACAACCTGGTGATAGATTTAAGCAATTAAAGGAGCAAGAGGCAAGGAGAAGACAACAAAGAGAAGAAGAAGAAAAAATGAAAGGCATGGAAACAGCAGCTAGAGAGACTGAAGTAGATGATAGTCACGTGACACTTGAGAAAACTGGAGGTGATTTAACTGTTGAAAAATCTCGGTCTGTGGGTTCAGATACTGATCCCTCCATATCTGGAGTGGTAAATGGCAACTTATTAAGTACAGACTTAGAGGGAAATCAGAATTTTACATCTACATCTGAGACAGAAAATAATGAAGGCTCTGCTCATTTCAACAATGATGAGATAAACGAGAAAAATTCAGACAAGGAACCAAGAGAAGTATTAACATCTACAACCACTGCAAACAGACAACCTCCTGCAGAAGATTCAGATCGCATGACAAAGGATTGA 1611 0.4556 MAALLPCAPNIVSAPFGNRSTSRLPNRPQSHAFSGSTRHFLRGSLSVARFGFKPEFLPEPEHAEGVLRELFGRAEGLLYTIADAAVSSSSDTVAASATAKQSNDWLSGITNYMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESSLAMRTLQPQIKAIQERYAGDQERLQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGAPPLGWSDTLAYLVLPVLLIVSQYISVQIMQSSQPNDPNMKSSQVLTKFLPLMIGYFALSVPSGLSLYWLTNNILSTGQQVWLQKLGGAKNPVRQVPDDIIKNDGTRVQKSISKLNSTIVEEAGQSEKTSEGPQPGDRFKQLKEQEARRRQQREEEEKMKGMETAARETEVDDSHVTLEKTGGDLTVEKSRSVGSDTDPSISGVVNGNLLSTDLEGNQNFTSTSETENNEGSAHFNNDEINEKNSDKEPREVLTSTTTANRQPPAEDSDRMTKD 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8795g00027 536 MobiDBLite consensus disorder prediction 498 512 - -
Vium8795g00027 536 MobiDBLite consensus disorder prediction 383 536 - -
Vium8795g00027 536 MobiDBLite consensus disorder prediction 395 448 - -
Vium8795g00027 536 NCBIfam membrane protein insertase YidC 133 347 IPR028055 -
Vium8795g00027 536 Pfam 60Kd inner membrane protein 133 347 IPR028055 -
Vium8795g00027 536 PANTHER OXA1 82 412 IPR001708 GO:0016020|GO:0032977
Vium8795g00027 536 MobiDBLite consensus disorder prediction 513 527 - -
Vium8795g00027 536 CDD 5TM_YidC_Alb3 134 347 IPR047196 -
Vium8795g00027 536 MobiDBLite consensus disorder prediction 450 497 - -
Vium8795g00027 536 Coils Coil 401 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8795g00027 Vium-Chr8795 140979 148067 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8795g00027 70 415 Chloroplast and Mitochondria Gene Families AT2G28800 56.897 5.07e-131 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8795g00027 K03217 - gmx:100815190 864.759