Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8753g00004 ATGAATGGTAAATATACGATGGTGGGGGAATCAAGAAAATGGGTGGTTCTTGGTGCATCAATATGGGTGCAGGCATTCACCGGAACAAACTTTGATTTCTCATCGTACTCTTCAGATTTGAAATCTGTGCTTGAGATAACTCAGCTTCAGCTGAACTATCTCTCTGTGGCCTCAGACATGGGAAAAGCCTTTGGGTGGTGCTCTGGTCTCTCACTTCTCCATTTTCCTTTCTGGGTTGTTCTCTTCATCGCTGCTTTCATGGGACTCTTTGGCTATGGCTTTCAATGGCTTCTCATTCATCGCTTCATCACTTTGCCTTATTCTCTTGTTTTCTTTCTCTGTCTGATTGCTGGCTGCAGCATCTCCTGGTTCAACACCATCTGCTACGTCCTATGCATCAGACATTTTCCTACAAACCGTTCACTTGCATTATCCTTGAGTGTTAGTTTCAATGGTGTGAGTGCAGCTTTGTACACTCTCATTGCCAATGCAATCAACTCAAACGATGACACTCTCTACCTATTACTCAATGCAATACTTCCAGTCCTGATATCTCTTCTAGTACTCCTCCCAATTCTCCATCAACCAAAGCCTCAACCACATTCTATTGACACCATTAAGCATGATTCATCAATCTTCCTCTGCCTCAACATCCTTGCCCTTGTAACAGGCCTCTACCTCATCTTCCTATATTCCTTCTCTTACACACTTGCCACTGCTCGTGTAATCCTTGTAGGTGCCATTTTACTCCTTGTGCTGCTCATTTTTGTTCCTTCTCTTATCTATTCTATGAAATCGTCTAGCTTTTCTCTCCCCACAAGTTTTTCCTTCTTCTACTCAATACTCACTCGCGATGACCCAGATGATAAAGAGCTTTACCAAGAGCTCATTACCATCGAAGACAGCGCGGAGAGTAAAAGTGCACAAAGCACAAGAGAGAAGAAAAGTCTCTTGGAGAGAGAGCAGCTTACTATGTTGGGGGAAGAGCATTCAATTAAGTTGCTAGTGCGTAGATGGGACTTCTGGTTGTACTACATAGCATATTTCTGTGGAGGAACAATTGGTTTGGCTTACAGCAACAACTTGGGGCAAATTTCCCAATCACTAGGACACTATTCTCACATTTCTTCTCTTGTCACACTCTACTCCACATGTTCCTTCTTTGGTCGCCTTCTTGCCGCCGCACCTGACTTCTTAAACAGGAGAATGCACTTTGCAAGAACAGGGTGGTTTGCAGCAGCCTTGGTGCCAACACCAATTGCATTCATTTTGTTGGCCATATCTGGTAGTGGAGCAGCATTGCACATAGGCACAGCCTTGATAGGGTTGAGTTCAGGCTTTGTGTTTTCTGCAGCAGTGTCTATTACCTCAGAGCTATTTGGTCCAAACAACGTTGGAGTGAACCACAACATCCTCATCACCAACATTCCTTTAGGTTCATGTCTCTATGGCCTTCTTGCAGCTTTGGTTTATGATTCCAATGCAATTAACTCAACCCATGAAATTTGGCTGCAAGAAATGTCCATGTGCATCGGGAGAAACTGCTACCTGCAAACATTCATTTGGTGGAGTTGCATTTCAATGGTGGGCTTGGTTTCAAGTTTCTTCTTCTTCTTAAGGACTAAACAAGCTTATGACAATTTTGAAAAGTATGATAACAGCAACAACATAGCTACATGA 1680 0.4321 MNGKYTMVGESRKWVVLGASIWVQAFTGTNFDFSSYSSDLKSVLEITQLQLNYLSVASDMGKAFGWCSGLSLLHFPFWVVLFIAAFMGLFGYGFQWLLIHRFITLPYSLVFFLCLIAGCSISWFNTICYVLCIRHFPTNRSLALSLSVSFNGVSAALYTLIANAINSNDDTLYLLLNAILPVLISLLVLLPILHQPKPQPHSIDTIKHDSSIFLCLNILALVTGLYLIFLYSFSYTLATARVILVGAILLLVLLIFVPSLIYSMKSSSFSLPTSFSFFYSILTRDDPDDKELYQELITIEDSAESKSAQSTREKKSLLEREQLTMLGEEHSIKLLVRRWDFWLYYIAYFCGGTIGLAYSNNLGQISQSLGHYSHISSLVTLYSTCSFFGRLLAAAPDFLNRRMHFARTGWFAAALVPTPIAFILLAISGSGAALHIGTALIGLSSGFVFSAAVSITSELFGPNNVGVNHNILITNIPLGSCLYGLLAALVYDSNAINSTHEIWLQEMSMCIGRNCYLQTFIWWSCISMVGLVSSFFFFLRTKQAYDNFEKYDNSNNIAT 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8753g00004 559 Gene3D MFS general substrate transporter like domains 269 532 IPR036259 -
Vium8753g00004 559 Pfam Nodulin-like 13 256 IPR010658 -
Vium8753g00004 559 SUPERFAMILY MFS general substrate transporter 12 200 IPR036259 -
Vium8753g00004 559 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 546 - -
Vium8753g00004 559 SUPERFAMILY MFS general substrate transporter 219 543 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8753g00004 Vium-Chr8753 68497 73288 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8753g00004 6 550 Nodulin-like Gene Family AT1G31470 54.000 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8753g00004 - - gmx:100804951 901.738