Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8752g00001 TGCGACCGAGTGCCTTCTTTCTCGCGTCGTCTGCTCCGAGTGCGACCTCGCCACTCCACCGACGACATCGTCAGCTCCGAGTGCGGCCTCGTCCCCGACCACGCCACCGGCGACGTCGTTTGCTCCGAGTGCGACCTCATCCTCGAGTCCCACTCCATCGACGAGACCTCCGACGGGCGACAACGACCCCAACCGTGTCGGCGATCCAAGTGGAACAGAAAGTTGATCGGAGTCAAGTTCTTTGCCAAGGGTTGTGAGGCCATGTTGGGTCCTATTAACGACACTGAGGAGTCTAGATCCCCTCGCGACGATGACGGTCACGACACCCACACAGCCAGCATAGCCACAGGATCGGTGGTTTTCGGCGTAAGTCTTTTTGGTTACGCATCCGGGACGACGCAAGGGATGGCGACGCACGCGAGAGTCGCTGCTTACAAGGCTTGCTGGAAGGGAGGGTGGAATGGCTGA 468 0.6026 CDRVPSFSRRLLRVRPRHSTDDIVSSECGLVPDHATGDVVCSECDLILESHSIDETSDGRQRPQPCRRSKWNRKLIGVKFFAKGCEAMLGPINDTEESRSPRDDDGHDTHTASIATGSVVFGVSLFGYASGTTQGMATHARVAAYKACWKGGWNG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8752g00001 155 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 64 149 IPR045051 -
Vium8752g00001 155 SUPERFAMILY Subtilisin-like 81 152 IPR036852 GO:0004252|GO:0006508
Vium8752g00001 155 Gene3D Peptidase S8/S53 domain 67 152 IPR036852 GO:0004252|GO:0006508
Vium8752g00001 155 MobiDBLite consensus disorder prediction 96 110 - -
Vium8752g00001 155 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8752g00001 Vium-Chr8752 972 1439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8752g00001 72 152 Subtilisin-like Serine Gene Family AT5G67360 69.136 5.66e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8752g00001 - - vum:124847519 328.561