Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium871g00021 ATGGGTAACGCAGACTATGCAAACCCAGTGGCTATTCCACCCCCTCAGTCATTCTTCAAGTCTCTCAAGTACTCCTTGAAAGAGACCTTTTTCCCAGATGACCCCTTTAGGAAGTTCAAGAACCAAACACCCTCTGTCAAGTTCGTCCTTGGACTTCAGTACTTCTTCCCCATCTTTGAATGGGCACCCAAATACACCCTCCAGTTCTTGAAATCAGACCTCATATCTGGCATCACCATTGCCAGTTTGGCCATTCCTCAAGGCATCAGCTACGCCAAGCTCGCCAACCTCCCTCCAATTCTTGGACTTTATTCGAGCTTCATACCCCCACTGATTTATGCTATGATGGGAAGCTCAAGGGATTTGGCAGTGGGAACTGTGGCGGTTGGATCACTTCTGATGGCTTCTATGTTGGGTCGAGTGGTGAACTACATCGAGAATCCAAACCTTTATCTCCATCTGGCTTTCACTGCTACATTCTTTGCTGGAATTTTGCAGGCATCACTGGGCCTCTTCAGGTTAGGGTTTATCGTGGATTTTCTGTCACATGCAACCATAGTAGGGTTCATGGGGGGAGCAGCCACAGTGGTTTGTCTGCAACAGCTAAAATCCATTCTTGGCCTTGAACATTTTACTCACGAGGCTGATATAGTGTCAGTGATGCGCTCTGTTTTCAGCCAAACTCACCAGTGGAGGTGGGAAAGCGCTGTGTTGGGTTGTTGCTTTATTTTCTTTCTCCTTGTCACAAGATACTTCAGCAAACGACAACCAAAGTTCTTCTGGGTGTCAGCAATGGCACCATTGGCATCGGTCATACTCGGAAGTCTGCTGGTTTATCTCACACACGCTGAGAAACATGGAGTTCAAGTGATAGGAAAATTGAAGAAGGGGCTGAATCCACCTTCCGTGACGAATTTGGTATTGGTGTCACCTTACATGGGAACTGCCATAAAAACTGGACTTGTCACCGGCATTATAGCACTTGCGGAAGGAATAGCAGTAGGCAGAAGCTTTGCAATGTTTAAAAATTATCATATTGATGGGAACAAAGAGATGATAGCTATTGGAACCATGAATATTTTTGGTTCGTTCACCTCTTGTTATCTCACCACAGGACCTTTTTCACGTTCGGCTGTGAACTATAATGCGGGGTGCAAGACTGCTGCATCAAACATTGTGATGGCAATAGCAGTGATGTTAACATTGTTATTCTTGACACCCTTGTTCCATTTCACTCCCCTGGTGGTGTTATCAGCCATAATTGTGTCGGCAATGCTCGGGCTCATTTATTATGAAGCAGCCATTCATTTGTGGAAAATCGACAAATTTGATTTCTTTGTGTGCTTCGGTGCTTACGTTGGTGTAGTCTTTGGCAGTGTTGAAATTGGCCTAGTCATAGCAGTTGCTGTATCTATACTTCGAGTACTTCTCTTCATTGCAAGGCCAAGAACATTTCTCTTAGGCAACATTCCAAACTCTACAGTATACAGAAACGTGGAACAATATCCAAATGCAAATCATGTTCCTGGAATCCTAATTCTTGAAATTGATGCACCCATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGGTGGATAGATGAAGAGGAGGATAGGATAAAAGCTTCAGACCAAACCAGTTTACAGTATGTTATAATTGATATGACTGCTGTTGGAAACATTGATACTAGCGGAATAAGCATGCTTGAAGAGTGCAAGAAAACTGTTGACAGAAGGGGGTTACAACTTGTTTTGGTAAATCCTGGAAGCGAGGTGATGAAGAAGCTGAACAAATCCAAGTTCCTTGATGAACTAGGGTATAAATGGGTGTATCTGACAGTTGAAGAGGCTGTTGGTGCATGCAATTTCATGCTCAACTCCTACAAACCGAACCCCATGAAGGATGATTCAGAAGGTTGGAACAATGCCTGA 1941 0.4384 MGNADYANPVAIPPPQSFFKSLKYSLKETFFPDDPFRKFKNQTPSVKFVLGLQYFFPIFEWAPKYTLQFLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGRVVNYIENPNLYLHLAFTATFFAGILQASLGLFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHEADIVSVMRSVFSQTHQWRWESAVLGCCFIFFLLVTRYFSKRQPKFFWVSAMAPLASVILGSLLVYLTHAEKHGVQVIGKLKKGLNPPSVTNLVLVSPYMGTAIKTGLVTGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIFGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHFTPLVVLSAIIVSAMLGLIYYEAAIHLWKIDKFDFFVCFGAYVGVVFGSVEIGLVIAVAVSILRVLLFIARPRTFLLGNIPNSTVYRNVEQYPNANHVPGILILEIDAPIYFANASYLRERITRWIDEEEDRIKASDQTSLQYVIIDMTAVGNIDTSGISMLEECKKTVDRRGLQLVLVNPGSEVMKKLNKSKFLDELGYKWVYLTVEEAVGACNFMLNSYKPNPMKDDSEGWNNA 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium871g00021 646 NCBIfam sulfate permease 57 620 IPR001902 GO:0016020|GO:0055085
Vium871g00021 646 ProSiteProfiles STAS domain profile. 501 624 IPR002645 -
Vium871g00021 646 SUPERFAMILY SpoIIaa-like 503 624 IPR036513 -
Vium871g00021 646 PANTHER SULFATE TRANSPORTER 16 627 IPR001902 GO:0016020|GO:0055085
Vium871g00021 646 Pfam Sulfate permease family 70 449 IPR011547 GO:0016020
Vium871g00021 646 FunFam Sulfate transporter 31 481 627 - -
Vium871g00021 646 Pfam STAS domain 502 620 IPR002645 -
Vium871g00021 646 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271|GO:0008272
Vium871g00021 646 CDD STAS_SulP_like_sulfate_transporter 502 617 - -
Vium871g00021 646 Gene3D STAS domain 481 626 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium871g00021 Vium-Chr871 130041 138361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium871g00021 3 634 Inorganic Solute Cotransporters AT4G02700 67.930 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium871g00021 K17471 - gmx:100791091 1197.19