Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8687g00013 ATGGCGAACCCTAAAACCAAGAGTCTTCATTCCCTGGGTGGCGAGGGCGATCCCGAATCATACGAATCGCGGTGGATTTTCCAGGAGGATGAGTATCCCTCTGAGATCGAGGACTTCGACGCCGCCGATTTACGCCACCAGCCTATGTTTGATTCTGAGGACGAGGACAATGGCGAGCATAGACTCGTTCGCACCGGTCCGCGAATCGATTCATTTGATGTCGAGGCTCTCGAGGTTCCCGGCGCTCAGAGAAACGACTACGAGGATGTTAGTGTGGGGAAGGGGATTCTGTTGGCTTTTCAAACTCTCGGTGTTGTTTTTGGTGACGTTGGAACGAGTCCTTTGTATACGTTCAGTGTTATGTTCAGGAAGGCTCCTATTAATGGAAATGAAGATATTCTTGGAGCTTTATCACTTGTTTTGTACACTTTAATTTTGATTCCTTTACTGAAGTATGTGCTTGTTGTTCTTTGGGCCAATGATGATGGGGAAGGTGGTACCTTTGCATTATACTCGTTGATTTGTCGAAATGCCAAGGTGAGTCTTCTTCCCAATCAGTTGCGATCGGATGCCCGAATATCGGGCTTTAGACTGAAGGTGCCATCTCCCGAGCTTGAAAGGTCTTTAAAAATCAAGGAAAGATTAGAGAATTCGCTGACTCTTAAGAAGATTCTACTATTATTAGTTCTTGCTGGTATTTCCATGGTGATAGCTAATGGGGTAGTTACGCCGGCAATGTCAGTATTATCATCTGTTAATGGTTTGAAGGTTGGGGTAGATGCAATTAAACAAGATGAAGTGGTGATGATTTCTGTTGCCTGCCTTATCGTTTTGTTCAGTGTACAGAAATATGGAACAAGTAAAGTGGGGCTTGTTGTAGTGCCTGCTTTGTTTATATGGTTTTGTTCTCTGGCGGGCATTGGTATATATAACCTTGTTAAATATGACAGCAGTGTCTTGAGGGCATTTAATCCTATTCACATATATTATTTCTTTGCAAGGAATTCAACTAAAGCATGGTATTCTCTTGGGGGCTGTATTCTGTGTGCAACTGGCTCGGAGGCAATGTTTGCAGATCTTTGCTATTTCCCTGTGCGGTCAGTTCAGCTTACATTTGTATTTCTTGTTTTACCGTGCCTACTGTTGGGATATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGCAATGCTTTCTATTCTTCTGTTCCAAGTGGGGCATTCTGGCCAACATTCCTCATTGCTAACATTGCTGCATTAATTGCAAGTCGGGCTATGACAACAGCCACATTTTCTTGTATAAAACAGTCTGCTGCACTTGGTTGTTTCCCTCGTCTTAAAATAGTTCATACCTCTCGGAAATTTATGGGACAGATCTATATCCCTGTCATAAACTGGTTTCTCTTGACTGTTTCTTTGGTGTTTGTCTGTACTATATCCAGCCTTGATGAGATTGGAAATGCATATGGCATTGCTGAGCTGGGTGTGATGATGATGACCACTATTTTAGTAACTCTTGTTATGCTTCTTATATGGCAGATTCACATCATTGTAGTGCTGATTTTTGCAGTAGTCTTCCTGGGATTGGAGTTGACTTTCTTTTCATCAGTTTTGTGGAGTGTAACAGATGGAAGTTGGATCATATTGGTCTTTGCAGTATTAATGTTTTTTATAATGTTTGTATGGAATTATGGCAGCAAGCTCAAATATGAAACTGAAGTAAAGCAAAAACTGTCAATGGATTTGATGCGAGAATTAGGCTGTAATCTTGGGACAATACGAGCTCCTGGAATCGGTTTGCTCTATAATGAGTTGGTGAAAGGAATTCCAGGCATTTTTGGCCATTTTCTAACCACGCTTCCAGCTATACACTCTATGATTATATTAGTGAGTATTAAATATGTTCCAGTTCCTATGGTTCCTCAAAGTGAAAGGTTTCTTTTTCGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGCATTGCCAGGTATGGTTACAAAGATGTTCGAAAAGAAAATCACCAGACTTTTGAGCAACTGTTGATGGAAAGCCTAGAGAAGTTTATACGTCGTGAAGCTCAGGAGAGGTCACTCGAGAGTGATGGGGATGATGATTCTGATTCTGAGGATGAGTACTCTGGTTCTAGGGTTCTCATAGCTCCCAATGGGAGTGTTTATTCTCTTGGCGTCCCTCTTCTGGCTGATTTTATTGATACAAACATACCCATACCCAATTTGGAAGCAAGCACATCTGAGGATGCAAACCCTGAATCTCCTAAGCCCCCAGTGCTTGATGCTGAGCAGAGTCTTGAGAGAGAATTATCTTTTATACGCAAGGCTAAAGAATCTGGAGTGGTTTACCTTCTTGGTCATGGGGATATAAGGGCTAGGAAAGACTCATGGTTTATCAAGAAGCTAATTATAAATTATTTTTATTCTTTTCTGAGAAAGAACTGCCGGAGGGGGATCACAAATTTAAGTGTACCCCATTCACATTTGATGCAGGTTGGCATGACCTACATGGTTTAA 2541 0.4187 MANPKTKSLHSLGGEGDPESYESRWIFQEDEYPSEIEDFDAADLRHQPMFDSEDEDNGEHRLVRTGPRIDSFDVEALEVPGAQRNDYEDVSVGKGILLAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLRSDARISGFRLKVPSPELERSLKIKERLENSLTLKKILLLLVLAGISMVIANGVVTPAMSVLSSVNGLKVGVDAIKQDEVVMISVACLIVLFSVQKYGTSKVGLVVVPALFIWFCSLAGIGIYNLVKYDSSVLRAFNPIHIYYFFARNSTKAWYSLGGCILCATGSEAMFADLCYFPVRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGNAFYSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSAALGCFPRLKIVHTSRKFMGQIYIPVINWFLLTVSLVFVCTISSLDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIHIIVVLIFAVVFLGLELTFFSSVLWSVTDGSWIILVFAVLMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIILVSIKYVPVPMVPQSERFLFRRVCQRSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESDGDDDSDSEDEYSGSRVLIAPNGSVYSLGVPLLADFIDTNIPIPNLEASTSEDANPESPKPPVLDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLIINYFYSFLRKNCRRGITNLSVPHSHLMQVGMTYMV 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8687g00013 846 MobiDBLite consensus disorder prediction 698 717 - -
Vium8687g00013 846 Pfam K+ potassium transporter 99 672 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium8687g00013 846 NCBIfam potassium uptake protein 98 846 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium8687g00013 846 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 94 844 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium8687g00013 846 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8687g00013 Vium-Chr8687 111362 129749 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8687g00013 11 846 Inorganic Solute Cotransporters AT5G09400 78.318 0.0 1303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8687g00013 - - gmx:100803841 1519.98