Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vium866g00008 ATGGTGCAGAAGAAAAAAGCTAGGGTTTCTGACGACGAGGAAATGAAAGGGCAGGGAGATGAAACCAGCCTCTACCAGGTTATTGGCGTGGAGAGAACTGCTTCTCAGCAGGAAATAAAGAAGGCTTACTACAAGTTGGCGTTGAGGCTTCATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAAGAGAAATTCCAACAACTGCAAAAGGTGATATCGATTCTTGGGGATGAAGAGAAGAGGACACTATATGATCAGACCGGATGTGTTGACGATGATGACCTTGCTGGAGATGTTGTTCAAAATCTTCAAGAGTTCTTCAGAACAATGTACAAGAAGGTCACGGAAGCTGATATTGAGGAGTTCGAAACAAACTACAAGGGATCTGACTCTGAAAAAAATGATTTGATGGATTTGTACAAGAAGTGCAAGGGTAACATGAATAGGCTTTTTTGTTCAATGCTTTGTTCAGATCCTAAATTTGATTCACACCGATTCAAGGATATTCTAGATGAGGCTATAGCTGCTGGAGAATTAAAGGCAACAAAAGCCTACCAGAAATGGGCTAAGGAAGTATCTGAAACCAAACCGCCTCCAAATCCTTTGAGGAGGGAAAAGTCTAATAAGCAGTCAGAAACAGATCTGTATGCAATGATAGCACAACGCCGAAATGAGAGGAAAGGCCAGTTTGATTCAATGTTCTCATCTCTAGTTTCAAAATATGGTGGAGGTGATATGCCGGAACCCTCTGAAGAGGAGTTTGAAGCTACACGGCGAAAGCTAGAGACTGGTAGATCCTCCAAAAAGTCAAAACAATCCAAGCGAAATTAA 831 0.42 MVQKKKARVSDDEEMKGQGDETSLYQVIGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRTLYDQTGCVDDDDLAGDVVQNLQEFFRTMYKKVTEADIEEFETNYKGSDSEKNDLMDLYKKCKGNMNRLFCSMLCSDPKFDSHRFKDILDEAIAAGELKATKAYQKWAKEVSETKPPPNPLRREKSNKQSETDLYAMIAQRRNERKGQFDSMFSSLVSKYGGGDMPEPSEEEFEATRRKLETGRSSKKSKQSKRN 276
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vium866g00008 276 CDD DnaJ 25 77 IPR001623 -
Vium866g00008 276 SMART dnaj_3 22 80 IPR001623 -
Vium866g00008 276 MobiDBLite consensus disorder prediction 251 269 - -
Vium866g00008 276 Gene3D DnaJ domain 7 102 IPR036869 -
Vium866g00008 276 Pfam DnaJ domain 24 85 IPR001623 -
Vium866g00008 276 ProSiteProfiles dnaJ domain profile. 23 88 IPR001623 -
Vium866g00008 276 MobiDBLite consensus disorder prediction 197 211 - -
Vium866g00008 276 PRINTS DnaJ domain signature 80 99 IPR001623 -
Vium866g00008 276 PRINTS DnaJ domain signature 43 58 IPR001623 -
Vium866g00008 276 PRINTS DnaJ domain signature 60 80 IPR001623 -
Vium866g00008 276 PRINTS DnaJ domain signature 25 43 IPR001623 -
Vium866g00008 276 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 13 272 IPR042977 -
Vium866g00008 276 MobiDBLite consensus disorder prediction 238 276 - -
Vium866g00008 276 MobiDBLite consensus disorder prediction 190 213 - -
Vium866g00008 276 SUPERFAMILY Chaperone J-domain 21 95 IPR036869 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vium866g00008 Vium-Chr866 94964 97287 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium866g00008 25 85 C2H2 Transcription Factor Family AT1G74250 36.364 2.38e-07 49.7