Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium866g00002 ATGTCGTGGCAAACTTACGTCGACGACCACCTTCTCTGCGAGATTGAAGGAAACCACCTAAGTCACGCCACTATCATCGGCCAGGACGGCAGCGTTTGGGCTCAGAGCTCCGGCTTTCCTCAGTTAAAACCTGAAGAAGTATCTGGGATTATGAATGACTTTAATGAGTCTGGAACACTTGCTCCCACTGGATTATTAGGGATTTCTTCATATCTGGAAATTTTTAATAAGCAGGAAGGATCATTGGATGACCAGGTTGGAAAGCTCAAAAGGCCGAAAGCTATGGCGTGTCGCGGCCGAAAAAGATCCCTCGACCAACGACGACGGTGA 330 0.4818 MSWQTYVDDHLLCEIEGNHLSHATIIGQDGSVWAQSSGFPQLKPEEVSGIMNDFNESGTLAPTGLLGISSYLEIFNKQEGSLDDQVGKLKRPKAMACRGRKRSLDQRRR 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium866g00002 109 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Vium866g00002 109 PRINTS Profilin signature 40 60 IPR005455 GO:0003779
Vium866g00002 109 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Vium866g00002 109 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Vium866g00002 109 PRINTS Plant profilin signature 52 66 IPR005455 GO:0003779
Vium866g00002 109 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Vium866g00002 109 SUPERFAMILY Profilin (actin-binding protein) 2 65 IPR036140 -
Vium866g00002 109 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Vium866g00002 109 Gene3D Dynein light chain 2a, cytoplasmic 1 102 - -
Vium866g00002 109 SMART prof_2 1 106 IPR005455 GO:0003779
Vium866g00002 109 PANTHER PROFILIN 1 65 IPR005455 GO:0003779
Vium866g00002 109 Pfam Profilin 1 65 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium866g00002 Vium-Chr866 7199 9039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium866g00002 1 74 Cytoskeleton Gene Families AT4G29350 70.667 3.05e-36 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium866g00002 K05759 - cit:102628130 125.176