Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8661g00004 ATGGGGATTCAGACAATGGGATCTCAAGGTATTGGGCAACAGTCTCATTTACAGTCTTCATCTTTGTCTAGGCAAGGTTCATGGTATAATCTTACTCTTGATGAGGTTAATAGTCAATTAGGAGACTTAGGGAAGCCATTGGGTAGCATGAACCTTGACGAGCTTCTTCAAAATGTGTGGACTGCCGAAGCAAGTAAGTCTTCGGTGATAGGTGCGGATAGTGAGAACATTTCGTCCTCTTCCTCGCTTCAGCGGCAGGCCAGCCTGACGCTGGCTCGTGCGTTGAGTGGGAAGACTGTGGATGACGTGTGGAGGGAAATTCAGCAAGGGCAGAAGAAAAGGTATGGAGGGGAAGTGAAAACTCAGGAGGGAGAAATGACTTTTGGTGAGACAACCTTGGAAGATTTCTTGGTGCAAGCAGGGCTTTTTGCTGAAGCTTCTATCAGTCCAGCTGTGGGGTTGGATACAATGGATTTCTCAGCAGCTCAAGGTTTCCAGCAGAAAACGGGCTTGTCTTCATCCCCTTCTATTGGCAGTTTATCGGACACGAGACCGGGCAGGAAAAGGGATGCTCCTGATGCATATGAGAAAACCCTGGAGAGGAGGTTGAGGAGGAAGATCAAGAATAGGGAATCTGCTGCTAGGTCACGAGCTCGTAAACAGGCTTACCATAATGAACTGGTTGGCAAGGTTTCCCGTCTAGAAGAAGAAAATGTAAAGCTAAAGAAAGAGAAGTCAGTGTTGTTAAATAGTAATTATAATGCCGCCACAACGCTATAG 780 0.4667 MGIQTMGSQGIGQQSHLQSSSLSRQGSWYNLTLDEVNSQLGDLGKPLGSMNLDELLQNVWTAEASKSSVIGADSENISSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGGEVKTQEGEMTFGETTLEDFLVQAGLFAEASISPAVGLDTMDFSAAQGFQQKTGLSSSPSIGSLSDTRPGRKRDAPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVGKVSRLEEENVKLKKEKSVLLNSNYNAATTL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8661g00004 259 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 199 252 - -
Vium8661g00004 259 Gene3D - 199 251 - -
Vium8661g00004 259 SUPERFAMILY Leucine zipper domain 201 253 IPR046347 GO:0003700|GO:0006355
Vium8661g00004 259 MobiDBLite consensus disorder prediction 166 196 - -
Vium8661g00004 259 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 248 IPR004827 GO:0003700|GO:0006355
Vium8661g00004 259 CDD bZIP_plant_BZIP46 201 252 - -
Vium8661g00004 259 Pfam bZIP transcription factor 201 248 IPR004827 GO:0003700|GO:0006355
Vium8661g00004 259 MobiDBLite consensus disorder prediction 166 181 - -
Vium8661g00004 259 SMART brlzneu 197 259 IPR004827 GO:0003700|GO:0006355
Vium8661g00004 259 Coils Coil 224 251 - -
Vium8661g00004 259 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Vium8661g00004 259 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 22 244 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8661g00004 Vium-Chr8661 22481 24397 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8661g00004 6 247 bZIP Transcription Factor Family AT3G56850 44.604 1.33e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vium8661g00004 bZIP_1 5.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8661g00004 K14432 - gmx:100798549 405.601