Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8658g00002 ATGGCATCCATCGATAAGCAAAAGAGAGAAGAGGAAAAAGAACCGTACAGAGTGGAAGAAGAAGACGAAGATAGCGAAGAAGAAGAAGGATGGGACGATTGGGAAGGAGAGCGAGAATTGGAATTCGCGTGTCTCTTCTGTGACTCCCAGTACAGTTCGTGCAGTTCTTTGTTCGATCATTGCGCCTCCCTTCACCATTTCGATTTCCACGCGATTAGAGCAAGTCTTAAACTGGATTTCTATGCCTCCTTCAAGCTCATCAACTTCGTTCGCTCTCAGGTGTCAGAGAACAAATGTTGGAGTTGTGGATTAACATGCCTGTGCAAGCGTGACTTGCAGAATCATTTGCATGATGTGATTGACTTTAATGAGATAAAGACTCTATGGAATGATGATAGATATCTAATACCTTTCCTGCAAGATGATTCTCTGCTGTACAGTTTTGGGGAATGTGACGAAGAAGGTGAAGATGAGCAAATTACACCAATTGATGAAGATCTTATAAAGGATTTGATGAACATTGATGAGAGAATCTCTGACGATCATGATTCTACGGAAAAATTTCTAGTTGATGATGGAAAATGTGATGCTTCTTTTTCTATTGATCATTTGAATAGGGATAGTTCTTCAAAAAGGGAGCTTATTAATGGTAAAGACTCAGTGGGACATGCTTTGTGCAGTGATAAGGATCCGAAAAAGGGACCTTTAATTGCTAATTCTCAAAATCACATTGCAAAACATATTAAGATGGTCAATGAAAGTTATTTTGGGTCATACAGTTCATTTGGTATCCATCGAGAGATGTTAAGTGATAAGGTGAGAATGGATGCTTATGGTCAAGCAATTTTGAAGAATCCCTCCCTACTAAACGGGGCTGTGGTTATGGATGTTGGTTGTGGAACTGGAATCCTCAGCCTATTTTCGGCACAAGCTGGAGCTTCCAGGGTTATTGCTGTTGAGGCTAGTGCCAAGATGGCAGCAGTGGCATCTCAGGTTGCAAAGGATAATGGTCTTTGGTGGAACAAAACACAAAGTGGAATTGATGGTCTCCCGAAGCGAGTCATAGAAGTGGTTCACGGTATGGTTGAAGAGATTGATAAAACAGTTGAACTTCAACCTCATAGTGTTGATGTATTGCTAAGTGAATGGATGGGGTATTGCTTACTGTATGAATCCATGCTTGGTTCTGTGCTTTATGCACGGGACCGGTGGTTGAAGCCTGGTGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGCAACAAGTCTTCCATTTTGGGACAATGTGTGTGGTTTTGACATGTCTTGCATTGGAAAGGAGCTTGTCATGGATGCTGCCCAAATTCCTATAGTTGATGTTCTGGACTCACAAGATTTAGTTACCAGTTCTGCGATTCTTCAGTCTTTTGACTTGGCAACCATGAAGCCCAATGAAGTCGATTTCACTGCGACTACTACTTTGGAATTGAAACCAAGTGCTTCAGCAACATGGTGCTGGTGCTATGGTGCTGTCCTATGGTTTGAAACTGGTTTTACAAGGAGATTCTGCCGAGAAACACCAGCTGTGTTATCCACATCCCCTTATACCCCAAGAACACATTGGTCACAAACAATCTTAACCTTTCGAGAACCTATTGCAATGGGGTTTGGAAAAGAACAGAGGGGTAAACTGGAAGCAATTGGCACTGAGGTGTATCCTGCTGTAAATATCGATTTACGCATCAGCATTGTCCGATCTACAGAGCATCGCAGCATTGACATTTCCTTAGAAGCTACTGGTGTTAGTCCTGATGGTCTGAAACGTGGTTGGCCTGCTCAACTTTTCAATCTGCAGTAG 1857 0.4233 MASIDKQKREEEKEPYRVEEEDEDSEEEEGWDDWEGERELEFACLFCDSQYSSCSSLFDHCASLHHFDFHAIRASLKLDFYASFKLINFVRSQVSENKCWSCGLTCLCKRDLQNHLHDVIDFNEIKTLWNDDRYLIPFLQDDSLLYSFGECDEEGEDEQITPIDEDLIKDLMNIDERISDDHDSTEKFLVDDGKCDASFSIDHLNRDSSSKRELINGKDSVGHALCSDKDPKKGPLIANSQNHIAKHIKMVNESYFGSYSSFGIHREMLSDKVRMDAYGQAILKNPSLLNGAVVMDVGCGTGILSLFSAQAGASRVIAVEASAKMAAVASQVAKDNGLWWNKTQSGIDGLPKRVIEVVHGMVEEIDKTVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGATSLPFWDNVCGFDMSCIGKELVMDAAQIPIVDVLDSQDLVTSSAILQSFDLATMKPNEVDFTATTTLELKPSASATWCWCYGAVLWFETGFTRRFCRETPAVLSTSPYTPRTHWSQTILTFREPIAMGFGKEQRGKLEAIGTEVYPAVNIDLRISIVRSTEHRSIDISLEATGVSPDGLKRGWPAQLFNLQ 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8658g00002 618 MobiDBLite consensus disorder prediction 1 15 - -
Vium8658g00002 618 MobiDBLite consensus disorder prediction 16 34 - -
Vium8658g00002 618 SUPERFAMILY beta-beta-alpha zinc fingers 26 161 IPR036236 -
Vium8658g00002 618 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 45 600 IPR025799 GO:0016274|GO:0018216
Vium8658g00002 618 Pfam Methyltransferase domain 294 409 IPR041698 -
Vium8658g00002 618 MobiDBLite consensus disorder prediction 1 34 - -
Vium8658g00002 618 Gene3D Vaccinia Virus protein VP39 244 413 IPR029063 -
Vium8658g00002 618 Gene3D - 415 606 - -
Vium8658g00002 618 FunFam Protein arginine N-methyltransferase 6 248 413 - -
Vium8658g00002 618 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 252 575 IPR025799 GO:0016274|GO:0018216
Vium8658g00002 618 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 258 564 IPR029063 -
Vium8658g00002 618 CDD AdoMet_MTases 294 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8658g00002 Vium-Chr8658 4071 9385 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8658g00002 19 617 C2H2 Transcription Factor Family AT3G12270 54.545 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8658g00002 K11436 - gmx:100778113 993.801