Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium8658g00002 | ATGGCATCCATCGATAAGCAAAAGAGAGAAGAGGAAAAAGAACCGTACAGAGTGGAAGAAGAAGACGAAGATAGCGAAGAAGAAGAAGGATGGGACGATTGGGAAGGAGAGCGAGAATTGGAATTCGCGTGTCTCTTCTGTGACTCCCAGTACAGTTCGTGCAGTTCTTTGTTCGATCATTGCGCCTCCCTTCACCATTTCGATTTCCACGCGATTAGAGCAAGTCTTAAACTGGATTTCTATGCCTCCTTCAAGCTCATCAACTTCGTTCGCTCTCAGGTGTCAGAGAACAAATGTTGGAGTTGTGGATTAACATGCCTGTGCAAGCGTGACTTGCAGAATCATTTGCATGATGTGATTGACTTTAATGAGATAAAGACTCTATGGAATGATGATAGATATCTAATACCTTTCCTGCAAGATGATTCTCTGCTGTACAGTTTTGGGGAATGTGACGAAGAAGGTGAAGATGAGCAAATTACACCAATTGATGAAGATCTTATAAAGGATTTGATGAACATTGATGAGAGAATCTCTGACGATCATGATTCTACGGAAAAATTTCTAGTTGATGATGGAAAATGTGATGCTTCTTTTTCTATTGATCATTTGAATAGGGATAGTTCTTCAAAAAGGGAGCTTATTAATGGTAAAGACTCAGTGGGACATGCTTTGTGCAGTGATAAGGATCCGAAAAAGGGACCTTTAATTGCTAATTCTCAAAATCACATTGCAAAACATATTAAGATGGTCAATGAAAGTTATTTTGGGTCATACAGTTCATTTGGTATCCATCGAGAGATGTTAAGTGATAAGGTGAGAATGGATGCTTATGGTCAAGCAATTTTGAAGAATCCCTCCCTACTAAACGGGGCTGTGGTTATGGATGTTGGTTGTGGAACTGGAATCCTCAGCCTATTTTCGGCACAAGCTGGAGCTTCCAGGGTTATTGCTGTTGAGGCTAGTGCCAAGATGGCAGCAGTGGCATCTCAGGTTGCAAAGGATAATGGTCTTTGGTGGAACAAAACACAAAGTGGAATTGATGGTCTCCCGAAGCGAGTCATAGAAGTGGTTCACGGTATGGTTGAAGAGATTGATAAAACAGTTGAACTTCAACCTCATAGTGTTGATGTATTGCTAAGTGAATGGATGGGGTATTGCTTACTGTATGAATCCATGCTTGGTTCTGTGCTTTATGCACGGGACCGGTGGTTGAAGCCTGGTGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGCAACAAGTCTTCCATTTTGGGACAATGTGTGTGGTTTTGACATGTCTTGCATTGGAAAGGAGCTTGTCATGGATGCTGCCCAAATTCCTATAGTTGATGTTCTGGACTCACAAGATTTAGTTACCAGTTCTGCGATTCTTCAGTCTTTTGACTTGGCAACCATGAAGCCCAATGAAGTCGATTTCACTGCGACTACTACTTTGGAATTGAAACCAAGTGCTTCAGCAACATGGTGCTGGTGCTATGGTGCTGTCCTATGGTTTGAAACTGGTTTTACAAGGAGATTCTGCCGAGAAACACCAGCTGTGTTATCCACATCCCCTTATACCCCAAGAACACATTGGTCACAAACAATCTTAACCTTTCGAGAACCTATTGCAATGGGGTTTGGAAAAGAACAGAGGGGTAAACTGGAAGCAATTGGCACTGAGGTGTATCCTGCTGTAAATATCGATTTACGCATCAGCATTGTCCGATCTACAGAGCATCGCAGCATTGACATTTCCTTAGAAGCTACTGGTGTTAGTCCTGATGGTCTGAAACGTGGTTGGCCTGCTCAACTTTTCAATCTGCAGTAG | 1857 | 0.4233 | MASIDKQKREEEKEPYRVEEEDEDSEEEEGWDDWEGERELEFACLFCDSQYSSCSSLFDHCASLHHFDFHAIRASLKLDFYASFKLINFVRSQVSENKCWSCGLTCLCKRDLQNHLHDVIDFNEIKTLWNDDRYLIPFLQDDSLLYSFGECDEEGEDEQITPIDEDLIKDLMNIDERISDDHDSTEKFLVDDGKCDASFSIDHLNRDSSSKRELINGKDSVGHALCSDKDPKKGPLIANSQNHIAKHIKMVNESYFGSYSSFGIHREMLSDKVRMDAYGQAILKNPSLLNGAVVMDVGCGTGILSLFSAQAGASRVIAVEASAKMAAVASQVAKDNGLWWNKTQSGIDGLPKRVIEVVHGMVEEIDKTVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGATSLPFWDNVCGFDMSCIGKELVMDAAQIPIVDVLDSQDLVTSSAILQSFDLATMKPNEVDFTATTTLELKPSASATWCWCYGAVLWFETGFTRRFCRETPAVLSTSPYTPRTHWSQTILTFREPIAMGFGKEQRGKLEAIGTEVYPAVNIDLRISIVRSTEHRSIDISLEATGVSPDGLKRGWPAQLFNLQ | 618 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium8658g00002 | 618 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Vium8658g00002 | 618 | MobiDBLite | consensus disorder prediction | 16 | 34 | - | - | |
Vium8658g00002 | 618 | SUPERFAMILY | beta-beta-alpha zinc fingers | 26 | 161 | IPR036236 | - | |
Vium8658g00002 | 618 | PANTHER | PROTEIN ARGININE N-METHYLTRANSFERASE | 45 | 600 | IPR025799 | GO:0016274|GO:0018216 | |
Vium8658g00002 | 618 | Pfam | Methyltransferase domain | 294 | 409 | IPR041698 | - | |
Vium8658g00002 | 618 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Vium8658g00002 | 618 | Gene3D | Vaccinia Virus protein VP39 | 244 | 413 | IPR029063 | - | |
Vium8658g00002 | 618 | Gene3D | - | 415 | 606 | - | - | |
Vium8658g00002 | 618 | FunFam | Protein arginine N-methyltransferase 6 | 248 | 413 | - | - | |
Vium8658g00002 | 618 | ProSiteProfiles | SAM-dependent methyltransferase PRMT-type domain profile. | 252 | 575 | IPR025799 | GO:0016274|GO:0018216 | |
Vium8658g00002 | 618 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 258 | 564 | IPR029063 | - | |
Vium8658g00002 | 618 | CDD | AdoMet_MTases | 294 | 412 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium8658g00002 | Vium-Chr8658 | 4071 | 9385 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium8658g00002 | 19 | 617 | C2H2 Transcription Factor Family | AT3G12270 | 54.545 | 0.0 | 646 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium8658g00002 | K11436 | - | gmx:100778113 | 993.801 |