Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8644g00027 ATGACAGCTATAAATAAATGCCAAGGGTTCCAATCCAACCATTCATGCTTCCATCTTCAGTTAAAAATGGCTTCCACCACCACCAATGCCAATGCCAAACAAATCGTTACAGAGATACCCGAGTGGGTTCGCGTCTTCAGTGATGGCACCGTTGAACGTCCGCGCGATTTTCCGATTGTCCCACCGACGCTGCACAACTCTAACACAGGAGTGTCGTCCAAGGACATTGCAATCTCAAACAAACCTCCAAAACCAATTTCGGCACGAATTTACCTCCCAAACATCTCCAATTCCCAGACAGAGAAGCTTCCCATCTACGTCTACTTTCACGGGGGTGGCTTCTTCTTCGAATCCGCCTTCTCCAAACTCTACGACGTCCATCTGCTGAAGTTGGTTTCTGAGGTAAAAGTTATGGTAGTTTCCGTGGAGTACAGACTGGCCCCAGAGCACCCTCTCCCTGCAAGTTATGATGATTGTTGGGAGGCTCTCAAATGGGTTGCATCACATTCTGACTCTACCAAATACCCCACAGACAACACTGAGCCATGGCTCATTCACCATGGTGACTTCAACAGAGTATTCATAGGAGGAGACAGTGCAGGTGCCAACATAGTCCACAACATTCTTGCCTTTCGTTTTGGGCATCAGTCCTTGCCTGGAGACGTTAAAATACTGGGCGCTGTTCTGGCTCATCCTTACTTTTATGCCTCACAGCCTGTTGGGTCTGAGCCTGTTACCGGAATTGAGCAGAACTTCTACAATCTTGTTTGGAAGTTGGCGTACCCATCTGCACCAGGTGGGATCGATAATCCCTTCATTAACCCTTTGGCTCCCGATGCTCCCAGTCTGGCTCAACTTGCTTGTTCTAAAATCTTCATCTGCGTTGCTGAAAAGGACGGTTTGTGCGACAGAGGAGTTTGGTACTATGAGGCTGTGAAGAAAAGTGGTTGGCAAGGTGAAATTCAATTCTTTCGGCAGGAAAACGAGGATCATGTTTACCATCTCCTCCAACCAGCCCTCAATCAAGACTCTCGTAACGCTTACAAATTGATCAACCTCATCGCTTCTTTTCTATATTTCTGTCTAAAAAAAAAACCTGACTCCTCTGTTTCTAATTACTCTGTTCACATGGCTTCCACCAACTCAAAAGAGATCGTTGCAGAGCTACCTACCTATATCAGAGTCTTCAGTGACGGCACCGTGGAAAGGCCAAGAGAAACACCCTTTGTCCCACCTTCAATTGATGACCCTCTAACAGGGGTCTCATCCAAAGACATCGTCATCTCTCAAAGCCCTCCTGTTTCAGCTCGAATTTACCTTCCCAAACTAGCCCCAACCAGTGACCGAGACCATCCTCAGAAGTTGCCCATCTTGGTCTACTTTCACGGTGGTGGATTTTTCTTTGAGTCCGCTTTCTCCGAACTATACCATCGCTACTTCAACATCTTCGTTTCCCAAACAAACGTCATAGCGGTTTCCGTGGAGTATAGGCTCGCTCCGGAGCACCCTCTCCCCGCATGTTACCATGATTGCTGGGACGCTCTCAAATGGGTTGCGTCCCATTCCGATCAAAACAACGCCACCAATGAAGATCCTTGGCTGATTTCCCACGGTAATTTCCAAAGAGTTTTCATTGGGGGGGACAGTGCAGGTGGGAACATAGTTCACAACATTGCCATGCGTGCTGGGACTGAACCCTTACCTTGTGATGTTAAAATATTAGGAGCTATTTTCTCCCATCCTTACTTCTGCAGTTCGGAGCCAATTGGATCTGAAGTTGTTACTGGGCACATACATCGTTTGTTCTGTTTAGTTTGGGACTTTGTGTACCCTTCTGCGTCGGGTGGCATTGATATCCCCATGTTCAACCCCTTCGCTCCTTTGGCACTAAGCTTGGATGGACTTGGGTGTTCCAAGATTATTGTGTGTGTGGCTAGCGAGGATAAAATTAGGGATAGAGGGGTTTGGTACTTGGAGGGTGTGAGAAAGAGTGGGTGGCAAGGAAAATTGGAACTGTTTGAAGAGCAAGGTGAGGATCATGTTTATCATATCTTCCATCCCGATTCTGAGAAAGCAATGAAGATGATCAAATGCTTGCGATTGTTTCTGCACGAGTAG 2118 0.4707 MTAINKCQGFQSNHSCFHLQLKMASTTTNANAKQIVTEIPEWVRVFSDGTVERPRDFPIVPPTLHNSNTGVSSKDIAISNKPPKPISARIYLPNISNSQTEKLPIYVYFHGGGFFFESAFSKLYDVHLLKLVSEVKVMVVSVEYRLAPEHPLPASYDDCWEALKWVASHSDSTKYPTDNTEPWLIHHGDFNRVFIGGDSAGANIVHNILAFRFGHQSLPGDVKILGAVLAHPYFYASQPVGSEPVTGIEQNFYNLVWKLAYPSAPGGIDNPFINPLAPDAPSLAQLACSKIFICVAEKDGLCDRGVWYYEAVKKSGWQGEIQFFRQENEDHVYHLLQPALNQDSRNAYKLINLIASFLYFCLKKKPDSSVSNYSVHMASTNSKEIVAELPTYIRVFSDGTVERPRETPFVPPSIDDPLTGVSSKDIVISQSPPVSARIYLPKLAPTSDRDHPQKLPILVYFHGGGFFFESAFSELYHRYFNIFVSQTNVIAVSVEYRLAPEHPLPACYHDCWDALKWVASHSDQNNATNEDPWLISHGNFQRVFIGGDSAGGNIVHNIAMRAGTEPLPCDVKILGAIFSHPYFCSSEPIGSEVVTGHIHRLFCLVWDFVYPSASGGIDIPMFNPFAPLALSLDGLGCSKIIVCVASEDKIRDRGVWYLEGVRKSGWQGKLELFEEQGEDHVYHIFHPDSEKAMKMIKCLRLFLHE 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8644g00027 705 Gene3D alpha/beta hydrolase 368 704 IPR029058 -
Vium8644g00027 705 Pfam alpha/beta hydrolase fold 458 683 IPR013094 GO:0016787
Vium8644g00027 705 Pfam alpha/beta hydrolase fold 107 334 IPR013094 GO:0016787
Vium8644g00027 705 Gene3D alpha/beta hydrolase 42 360 IPR029058 -
Vium8644g00027 705 SUPERFAMILY alpha/beta-Hydrolases 380 704 IPR029058 -
Vium8644g00027 705 PANTHER ARYLACETAMIDE DEACETYLASE 389 690 - -
Vium8644g00027 705 SUPERFAMILY alpha/beta-Hydrolases 34 362 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8644g00027 Vium-Chr8644 196467 201055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8644g00027 384 703 Carbohydrate Esterase AT3G48700 40.798 5.95e-76 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8644g00027 - K13258 vum:124847336 1449.88