Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8633g00003 ATGGGTTCTTCATCCCCTTCTTCCTCCTTCTCTTCCTCTGCTTCGTCGTCGTCCTCCTCCTCATCTTCTTCTACAGTGAACAACCCCAACATCTGCATGCACTGCAACTCCTACATTACAACCTTGGTTAACGGGTGGCCTCTCGGTGATGGTACTGTAGCTCAACTCTGCCACCGATGCGGCATATTCTATCAAGAAGGAACCTTTTGTGAGACATTTCACAGGAACTGTACGGGATGGTTAGAGTGTGCAGTTTGCCTGAAGAAGTTGCATACTAATTGCATTGTGTCAAGGTCAGAAGTTCACTTCAAGTTGTTTGGAAGACTTTGTTGCAAGGTTTGTGCAAAGAAACTCATACGAAGATGA 366 0.459 MGSSSPSSSFSSSASSSSSSSSSSTVNNPNICMHCNSYITTLVNGWPLGDGTVAQLCHRCGIFYQEGTFCETFHRNCTGWLECAVCLKKLHTNCIVSRSEVHFKLFGRLCCKVCAKKLIRR 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8633g00003 121 ProSitePatterns Zinc finger PHD-type signature. 32 114 IPR019786 -
Vium8633g00003 121 MobiDBLite consensus disorder prediction 1 30 - -
Vium8633g00003 121 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 30 117 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8633g00003 30 115 B3 DNA Binding Superfamily AT2G30470 40.449 4.33e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8633g00003 - K09287 pvu:PHAVU_005G086100g 160.614