Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8599g00001 ATGGAAGGTTCTAGGATGGAGAATTTAGTCAGAGCTGAGAAATCGCTGAGGCTCAGCTTAGAAAAATCGAAGTCGGTGGGGTTGGCTTTGGAGAGAGCGGGACCGAGGTTGGCCGAAATCAGGCAGCGGCTACCGTCGTTGGGATCGGCGGTGCGGCCGATTCGCGCTGAGAGAGACGCTCTGGTGGCCGTCGGCGGCCATATCAACCGCGCTGTGGGCCCCGCCGCCGCGGTGCTCAAGGTTTTTGACGCCGTCCATGGATTGGAGAAGTCGCTGCTGTCGGATCCCCGGAGCGACATAGCCGGGTACTTGTCGGTACTGAAACGTCTCCAGGAGGCGCTGAGGTTCTTGGGGGATAATTGCGGGTTGGCTATACAGTGGTTGGAAGACATAGTTGAGTATTTGGAGGACAATTCCGTTGCTGATCAGGTTTATCTGGCGAATTTGAAGAAGGAATTGAAGAATCTTCGCGAATCGCAGCACGGTGAACTCGATGGTGGGTTGTTGGATGCTGCATTGCGCAAGTTGGAGGATGAGTTCAGGTTGCTGTTGACTGAGAATAGCGTGCCACTGCCGATGTCGGCGGCGGCGGCGGGTGATGGTATGGCGTGCATTGCGCCGTCGCCGCTGCCTGTATCGGTTGTGCAGAAGCTGCAGGCGATTCTGGGGCGGTTGATTGCCAATGACAGGCTGGATAGGTGTGTGGGGATTTATGTTGAGGTGAGGAGTTCGAATGTTAGGGCAAGTTTGCAGGCGCTGAATTTGGATTACCTTGAGATTTCTGTGTCGGAGTTCAATGACGTGCAGAGCATTGAAGGGTATATAGCTCAGTGGGGGAAGCATTTGGAGTTTGCTGTGAAGCATTTGTTTGAGGCTGAGTATAAGCTTTGCAATGATGTGTTTGAGAGGATTGGATTGGACGTGTGGATGGGTTGCTTTTCGAAGATAGCTGCGCAAGCGGGTATACTGGCGTTTCTTCAGTTTGGGAAGACAGTTACTGAGAGTAAGAAGGACCCCATTAAGCTTTTGAAGTTGTTGGATATTTTCGCGTCGTTGAGCAAGTTGAGATTGGATTTCAACCGGCTTTTTGGTGGTGGGCCATGTGTTGAGATACAGAATTTGACTAGGGATCTTATCAAGAGGGTGATTGATGGGGCTGCGGAGATTTTCTGGGAGCTTTTTGTTCAGGTGGAGTTGCAGAGGCCGAATCCACCACCAGGGGATGGCAATGTGCCGAGATTGGTGAGCTTTATCACTGATTACTGTAACAAGCTCCTTGGGGACGACTATAAGCCGATACTGACTCAGGTTCTGATAATTCACAGAAGTTGGAAGCGCCAAAGCTTTCAGGAGAGACTCCTTGTTACTGAGATTTTGAACATTGTGAAGGCTGTTGAGCAGAATGTAGAGACTTGGATCAAGGCTTATGATGATCCTATACTGTCCCACTTTTTTGCTATGAACAATCACTGGCATCTGTGCAAGCATTTGAAAGGGACAAAGCTTGGGGAACTCTTGGGGGATTCTTGGCTGAGGGAGCACGAACAGTATAAGGAGTATTACTCTACAATCTTTTTGAGGGACAGTTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGGTTGATTCTTTTCTCTGGAGGGCGCGCCACTGCCCGTGACCTGGTCAAGAAAAGGTTGAAGAAGTTCAATGAAGTTTTTGATGAGATGTATACTAAGCAGTCAAGTTGGATAATGCCAGAACGGGATCTGAGGGAGAAAACATGTCAGCTTATAGTGCAAGCTGTGGTGCCTGTATACCGCAGTTACATGCAGAATTATGGTCCTTTGGTGGAGCAAGATGCTAGCTCCACAAAATATGCAAAGTACACCGTTCAGAAGCTTGAAGAAATGCTCTTGTGTCTTTATCGGCCAAGGCCTGCAAGACATGGCAGCTTGAGAAGTCCAACATTTAGTGCAAAATATGGCAATGGAGTACCTGATCTTCGCAGAACAGCATCTGCAGTTGTGTAA 2013 0.4943 MEGSRMENLVRAEKSLRLSLEKSKSVGLALERAGPRLAEIRQRLPSLGSAVRPIRAERDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRSDIAGYLSVLKRLQEALRFLGDNCGLAIQWLEDIVEYLEDNSVADQVYLANLKKELKNLRESQHGELDGGLLDAALRKLEDEFRLLLTENSVPLPMSAAAAGDGMACIAPSPLPVSVVQKLQAILGRLIANDRLDRCVGIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLSKLRLDFNRLFGGGPCVEIQNLTRDLIKRVIDGAAEIFWELFVQVELQRPNPPPGDGNVPRLVSFITDYCNKLLGDDYKPILTQVLIIHRSWKRQSFQERLLVTEILNIVKAVEQNVETWIKAYDDPILSHFFAMNNHWHLCKHLKGTKLGELLGDSWLREHEQYKEYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYTKQSSWIMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDASSTKYAKYTVQKLEEMLLCLYRPRPARHGSLRSPTFSAKYGNGVPDLRRTASAVV 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8599g00001 670 Gene3D Exocyst complex component Exo70 76 643 - -
Vium8599g00001 670 Pfam Exo70 exocyst complex subunit 277 632 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vium8599g00001 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 71 632 IPR004140 GO:0000145|GO:0006887
Vium8599g00001 670 FunFam Exocyst subunit Exo70 family protein 128 642 - -
Vium8599g00001 670 SUPERFAMILY Cullin repeat-like 78 636 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8599g00001 Vium-Chr8599 15445 19522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8599g00001 6 670 EXO70 exocyst subunit family AT4G31540 72.378 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8599g00001 K07195 - gmx:100796139 1233.01