Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8575g00006 ATGGCTTCTTCTCATCTATCTTTCCTCTTTCTTATACTTCTCTCTGTTCTTCTTTCTGTCTCATCCTCATCGGACGCTCCACAAACCTACATAGTCCACGTGGCGCAATCGCAGAAGCCCACGCTTTTCTCCACACACCACCACTGGTACACTTCCATCGTCCGCTCCCTCCCTACCTCCCCCCACACAGCCACCCTCCTCTACACCTACTCCGCCGCCGCCGCCGGCTTCTCCGTCCGTATCACGCCCTCACAGCTCTCTCACCTCCGCAGCCACCCCGCCGTCCTCGCGGTCGAGCCTGACCAGGTCCGCCACCCCCACACCACCCACACCCCGCGGTTCCTCGGCCTCGCCGACTCCTTCGGCCTCTGGCCCAACTCTGACTACGCGGATGACGTCGTCATCGGCGTCCTGGACACCGGGATATGGCCGGAGCTGAGGAGCTTCAACGACGACAACCTCTCTCCTGTTCCCTCCACATGGAAAGGATCTTGCGAAGCCTCGCGCGACTTCCCCGCTTCCTCCTGCAATAGAAAAATAATCGGCGCCAAAGCCTTTTACAAAGGCTACGAAGCGTACCTCGATGGACCGATCGATGAAACCGAGGAATCGAAGTCTCCGCGAGACACCGAAGGCCACGGCACGCACACCTCTTCCACAGCAGCAGGCGCCGTCGTTTCCAACGCGAGTTTGTTTCATTACGCTCAAGGCGAAGCCAGAGGAATGGCCACAAAAGCCAGAATCGCCGCTTACAAGATCTGCTGGAAATACGGTTGCTTTGATTCCGATATCCTTGCCGCCATGGACGAGGCTGTCGCCGACGGAGTTCACGTGATTTCGCTCTCCGTCGGCGCGTCAGGTTACTCGCCGCAGTATTTCCGTGATTCGATCGCTTTGGGAGCTTTTGGCGCTGCTCGTCACAATGTTCTGGTTTCGTGTTCCGCCGGGAACTCAGGGCCTGGTCCCTCCACTGCTGTGAACATTGCACCGTGGATTTTAACCGTTGGAGCCTCCACAATAGATCGAGAATTTCCTGCTAATGTTGTCCTCGGAGATGGAAGGGTTTTCGGTGGGGTGTCTCTGTATTACGGTGAAAGTTTGCCTGATTTTAAGCTTCGATTAATATATGCTAAAGATGCTGGGAACAGGTACTGTTACCTGGGGTCTCTGATACCTTCTAAAGTGCAGGGGAAGATTGTTGTTTGCGACAGGGGTGGGAATGCTAGGGTTGAGAAGGGGAGTGCAGTGAAGCTTGCCGGTGGGTTGGGAATGATTTTGACTAACCCTGCCGAGAATGGTGAAGAGCTTCTTGCTGATGCACATCTTTTGCCAGCTACCATGGTGGGTCAAATTGCAGGGGATGAGATCAAGGAGTATGTAAGGTTGAGTCAGTACCCAACTGCGACTATTGAGTTTAAAGGAACTGTGATTGGGGATTCTCCTTCTGCTCCTCAGGTTGCTTCATTTTCTAGCCGTGGACCCAACCGTCTCACGCCGGAGATTCTCAAACCTGATGTCATTGCTCCTGGTGTTAACATTTTGGCAGGGTGGACTGGGAGAGTGGGGCCTACGGATTTGGACCTTGATCCTAGGAGGGTTGAGTTTAACATTATTTCGGGAACTTCTATGTCTTGTCCTCATGCCAGTGGCATCGCTGCATTGCTTAGGAAAGCCTATCCCGAGTGGTCACCTGCGGCTGTCAAGTCTGCTTTGATCACAACTGCTTATAATGTGGATAATTCTGGAGAGAATATTAAGGATCTTGGAACTGGGAAGGACTCAAATCCGTTTACACATGGAGCTGGTCATGTTGATCCCAACAGGGCTCTTAACCCCGGCTTGGTTTATGATTCTGATACTAATGACTATTTGGCGTTTTTGTGCTCAATTGGGTACGATGCTAATCAGATTGCGGTTTTCACTAGAGAGCCTGCTGCTGCAAACGTTTGTGAAGGGAAAGTGGGTAGGACTGGGAGGTTGGCTAGTCCCGGTGATTTGAATTACCCTTCTTTCTCTGTGCAGTTGGGTGGGGGAAATGATTTGGTCAAGTATAAAAGGGTTGTTACTAATGTGGGAAGTGTTGTTGATGCTGTTTACACCGTGAAAGTAAATGCTCCACCTGGTGTTGCTGTTACAGTGTCCCCCAGCACACTTGTTTTCAGTGATGAAAACAAGACACAGGCATTTGAGGTTGCTTTTGGCAGAGTCACGTCCGATAATTCTGACAGTTTTGGGTCAATTGAATGGACTGATGGAAGTCACGTTGTGAGGAGTCCAATTGCTGTTACATGGAGAAGGAGTGGTGATTACTCATCATCCCTTTGA 2325 0.5166 MASSHLSFLFLILLSVLLSVSSSSDAPQTYIVHVAQSQKPTLFSTHHHWYTSIVRSLPTSPHTATLLYTYSAAAAGFSVRITPSQLSHLRSHPAVLAVEPDQVRHPHTTHTPRFLGLADSFGLWPNSDYADDVVIGVLDTGIWPELRSFNDDNLSPVPSTWKGSCEASRDFPASSCNRKIIGAKAFYKGYEAYLDGPIDETEESKSPRDTEGHGTHTSSTAAGAVVSNASLFHYAQGEARGMATKARIAAYKICWKYGCFDSDILAAMDEAVADGVHVISLSVGASGYSPQYFRDSIALGAFGAARHNVLVSCSAGNSGPGPSTAVNIAPWILTVGASTIDREFPANVVLGDGRVFGGVSLYYGESLPDFKLRLIYAKDAGNRYCYLGSLIPSKVQGKIVVCDRGGNARVEKGSAVKLAGGLGMILTNPAENGEELLADAHLLPATMVGQIAGDEIKEYVRLSQYPTATIEFKGTVIGDSPSAPQVASFSSRGPNRLTPEILKPDVIAPGVNILAGWTGRVGPTDLDLDPRRVEFNIISGTSMSCPHASGIAALLRKAYPEWSPAAVKSALITTAYNVDNSGENIKDLGTGKDSNPFTHGAGHVDPNRALNPGLVYDSDTNDYLAFLCSIGYDANQIAVFTREPAAANVCEGKVGRTGRLASPGDLNYPSFSVQLGGGNDLVKYKRVVTNVGSVVDAVYTVKVNAPPGVAVTVSPSTLVFSDENKTQAFEVAFGRVTSDNSDSFGSIEWTDGSHVVRSPIAVTWRRSGDYSSSL 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8575g00006 774 MobiDBLite consensus disorder prediction 198 212 - -
Vium8575g00006 774 SUPERFAMILY PA domain 390 457 IPR046450 -
Vium8575g00006 774 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Vium8575g00006 774 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Vium8575g00006 774 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Vium8575g00006 774 ProSiteProfiles Serine proteases, subtilase domain profile. 112 610 - -
Vium8575g00006 774 SUPERFAMILY Protease propeptides/inhibitors 27 105 - -
Vium8575g00006 774 Gene3D Peptidase S8/S53 domain 132 623 IPR036852 GO:0004252|GO:0006508
Vium8575g00006 774 Pfam Fibronectin type-III domain 665 762 IPR041469 -
Vium8575g00006 774 FunFam subtilisin-like protease SBT1.5 341 477 - -
Vium8575g00006 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 762 IPR045051 -
Vium8575g00006 774 Pfam Peptidase inhibitor I9 29 105 IPR010259 -
Vium8575g00006 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Vium8575g00006 774 Pfam Subtilase family 131 580 IPR000209 GO:0006508|GO:0008236
Vium8575g00006 774 FunFam Subtilisin-like protease SBT1.5 132 354 - -
Vium8575g00006 774 Coils Coil 772 774 - -
Vium8575g00006 774 MobiDBLite consensus disorder prediction 198 219 - -
Vium8575g00006 774 SUPERFAMILY Subtilisin-like 106 614 IPR036852 GO:0004252|GO:0006508
Vium8575g00006 774 Pfam PA domain 374 456 IPR003137 -
Vium8575g00006 774 Gene3D - 341 477 - -
Vium8575g00006 774 CDD PA_subtilisin_like 347 470 - -
Vium8575g00006 774 Gene3D - 627 764 - -
Vium8575g00006 774 CDD Peptidases_S8_3 105 576 IPR034197 -
Vium8575g00006 774 FunFam Subtilisin-like protease SBT1.9 18 107 - -
Vium8575g00006 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 107 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8575g00006 Vium-Chr8575 49284 51936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8575g00006 1 764 Subtilisin-like Serine Gene Family AT3G14067 65.370 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8575g00006 - - gmx:100793990 1321.61